Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00777 ATGGCAACTGCAACAATGGCTACTGCAGCAGGTGCAGCAGCTTTATTGTACTATACATTGAATAGGAAATTGCAGACTCAAACCACAATTGATGAAGATGGTGATGAAAGTGGTAGTGATGCACCAACTGACATGCGGTTTCGTGTTACTCATAGGTTAATCCAAGCGCCTGCGACATGGTTGGAGACAATTTCAACATTGTCTGAAACTCTTAGGTTTACGTATTCGGAGACGCTTGGTAAATGGCCTATTGGGGATTTGGCATTTGGTATCAGCTTTCTTCTCAAGAGACAGGGGAACTATCATGTTGACAGTATATTTGGTGGTAAGGACAGTGTACAGCTCAAAGGGTCCGAGATTACTGCTGAACTTAAGCATCTGTTAAACTTGCTGACTCTGTGTTGGCATTTTTCAAAGAAGCCCTTTCCCTCGTTTCTAGAAGAAACTGGTTACACTGATGAGAATGTTCTTCTTCGGGAAGCGAAAGCTGGCATTTTGAAACCAGCTTTTACAATCATAGTTGATCACAAAATGAGGCGTTTGTTACTGTTGATTCGTGGCACACATAGTATCAAGGATACTCTAACAGCGGTTACAGGAAATGTCGTACCATTTCATCACACTGTAGTTCATGAGGGGGGTGTTAGTGATTTGGTTTTAGGTTATGCGCATTGTGGAATGGTTGCTGCTGCACGTTGGATTGCAAAGCTTGCAACTCCTTGCCTCCTTGATGCACTTAGTCAATACCCAGACTATGAAGTCAAGATTGTAGGACACTCTTTGGGTGGAGGTACAGCAGCAATTCTAACATACGTATTAAGAGAGCAAAAGGAACTGTCTGTGACTACATGTGTTACATTTGCTCCAGCTGCTTGTATGACATGGGAGTTGGCAGAGTCAGGCACTAGTTTTATTACTTCTATTATAAATGGAGCTGATTTGGTGCCTACATTTTCTGCTGCATCTGTCGATGACTTGCGTACCGAGGTGACTGCATCAGCATGGATAAATGACTTGAGGAATCAAATTGAGCAAACAAGAATACTCAGTACTGTCTATCGTTCTGCCTCGGCACTTGGTTCTCGCCTCCCATCTATTGCAAGTGCTAGAGCAAAAGTTGCCGGTGCTGGTGCTATGTTGCAGCCAGTTTCTAACGGCACCCAGGTTGTGATGAAAAGGGCCAAGAGTATGGCTCAGGCAGCATGGACACGTCCAAACCTTAACCTGACTTCTTGGTCATGTATTGGACCCCGTCGCCGAGCCACAGGTCATTCCAATTCCAAAGAAGATGGAAGTTCTCCTTCATCTTCAGCCTCTGACAATGCAGAAAGTTCTGAGCCCCTTATTTTTTCACCAAGGAAGGGAATAAATGCCAAGAGCATGAACCTTCCTGTATCTTCATCTGTAGATGAGTGGTCAACTGAAATTGAATGTGAGAATGAAAGTAATGTAGATGCTGAGGTCGACGATGATCTCCATCTCAGTGAGAACATGATGGATCATGAAAGATACGAAGATCAGATGAGTGAAGTCGAGTTGTGGCAACAACTGGAGCATGAGTTGTATGACAGACCTGAAGGTGAGGAAACTGACGTGGCGAAGGAGATAAGAGAAGAAGAGGAAGCAGCCACAACCGAGGTAGTAGGACAAACCCGTAACAGGTCTGCCCCAGAAATTAATGAAGTTCACAGATTTTTCCCTCCAGGAAAAATAATGCACATTGTTACACTCCACTCCGATTCTACCGAGATTGAAAGTGATGGCAGCCGAACCTCTTCTACAAGTTCGGACGATAGCGAACCAATTGAGACTAAGATTGGGATTTTCCTAACTTCAAGGTCTCTATATAGTAAACTCAGACTTTCACAGACCATGATAAGTGATCACTTCATGCCAATATATAGAAAGCAGATTGAGAGGCTAATTAAAGAACTCGAAGAAAAATCTATTGAAGATCATAGAACACAAGAAGTAATGTTATAG 1983 0.4327 MATATMATAAGAAALLYYTLNRKLQTQTTIDEDGDESGSDAPTDMRFRVTHRLIQAPATWLETISTLSETLRFTYSETLGKWPIGDLAFGISFLLKRQGNYHVDSIFGGKDSVQLKGSEITAELKHLLNLLTLCWHFSKKPFPSFLEETGYTDENVLLREAKAGILKPAFTIIVDHKMRRLLLLIRGTHSIKDTLTAVTGNVVPFHHTVVHEGGVSDLVLGYAHCGMVAAARWIAKLATPCLLDALSQYPDYEVKIVGHSLGGGTAAILTYVLREQKELSVTTCVTFAPAACMTWELAESGTSFITSIINGADLVPTFSAASVDDLRTEVTASAWINDLRNQIEQTRILSTVYRSASALGSRLPSIASARAKVAGAGAMLQPVSNGTQVVMKRAKSMAQAAWTRPNLNLTSWSCIGPRRRATGHSNSKEDGSSPSSSASDNAESSEPLIFSPRKGINAKSMNLPVSSSVDEWSTEIECENESNVDAEVDDDLHLSENMMDHERYEDQMSEVELWQQLEHELYDRPEGEETDVAKEIREEEEAATTEVVGQTRNRSAPEINEVHRFFPPGKIMHIVTLHSDSTEIESDGSRTSSTSSDDSEPIETKIGIFLTSRSLYSKLRLSQTMISDHFMPIYRKQIERLIKELEEKSIEDHRTQEVML 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00777 660 Gene3D alpha/beta hydrolase 136 356 IPR029058 -
Trre15g00777 660 MobiDBLite consensus disorder prediction 427 446 - -
Trre15g00777 660 Coils Coil 631 651 - -
Trre15g00777 660 Pfam Lipase 3 N-terminal region 48 127 IPR005592 GO:0016042
Trre15g00777 660 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 6 648 - -
Trre15g00777 660 Pfam Lipase (class 3) 183 320 IPR002921 GO:0006629
Trre15g00777 660 MobiDBLite consensus disorder prediction 418 448 - -
Trre15g00777 660 SUPERFAMILY alpha/beta-Hydrolases 144 320 IPR029058 -
Trre15g00777 660 CDD Lipase_3 174 319 - -
Trre15g00777 660 MobiDBLite consensus disorder prediction 581 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00777 Trre-Chr15 5725522 5730476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00777 15 653 Acyl Lipid Metabolism Gene Families AT3G14075 63.580 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00777 - - gsj:114390808 1018.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00777 15 5725522 5730476 Trre15g00777 15 5725522 5730476 ECH