Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00708 ATGGAAGGGGATATATTTGGAGAATTAGGTGATACAAGTCAAGTAGATGGTAGAGTTTTACAAGTATTTCAGAAGAGTTTAGTGCAAGCACAAGATATTTTGAATCAAAATCGGCTTTTAATCAACGAGATTAACCAAAATCATGAGTCTAGGATGCCGGATAATCTGAGCAGAAATGTTGGTTTGATTAGAGAACTCAATAGTAATATCAGAAGGGTTGTTGATCTCTATGCTGATCTTTCGAGTTCTTTCACCAAGTCGCAAGAAGCTTCGTCTGAAGGAGACTCTAGTGGAACTCTCAAATCTGATGGAAAAATCAACCAGAAGAGAATTAGATCCAGTTAA 345 0.3681 MEGDIFGELGDTSQVDGRVLQVFQKSLVQAQDILNQNRLLINEINQNHESRMPDNLSRNVGLIRELNSNIRRVVDLYADLSSSFTKSQEASSEGDSSGTLKSDGKINQKRIRSS 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00708 114 MobiDBLite consensus disorder prediction 83 104 - -
Trre15g00708 114 MobiDBLite consensus disorder prediction 83 114 - -
Trre15g00708 114 Pfam Early Flowering 4 domain 14 95 IPR009741 -
Trre15g00708 114 PANTHER PROTEIN ELF4-LIKE 4 11 113 IPR040462 GO:0042753
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00708 Trre-Chr15 5266431 5266775 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00708 - - gmx:100499633 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00708 15 5266431 5266775 Trre15g00708 15 5266431 5266775 ECH