Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00693 ATGAGTTTTCTGTTCGGCAGTAGAAAGACTCCCGCAGAGCTTTTGAGGGAAAATAAAAGAATGCTAGACAAGTCTATTAGAGAAATTGAAAGGGAAAGACAAGGTTTACAGTCTCAAGAAAAGAAATTGATTGCTGAGATTAAGAAGAATGCCAAACAAGGACAAATGGGTGCTGTGAGGGTTATGGCCAAGGATCTTATCAGAACTCGCCATCAAATTGAAAAGTTTTACAAGCTTAAATCACAACTTCAGGGAGTTTCGTTGAGAATTCAGACGCTTAAATCTACTCAAGCGATGGGGGATGCTATGAAAGGAGTTACTAAAGCGATGGGTCAAATGAATAGGCGGATGAATCTGCCTTCTTTACAGAAGATAATGCAAGAGTTTGAAAGGCAGAATGAGAAAATGGAACTTGTTTCTGAGGTAATGGGAGATGCTATTGATGATGCTTTAGAAGGTGATGAAGAAGAGGAGGAGACAGAAGATCTTGTGAATCAGGTTCTTGATGAGATCGGAATCGATATCAATTCTGAGCTTTTGAACGCACCTGCATCTACCTCGGTCGCTGCACCAGCGGTAAAGAACAGGGTTGCTCATGCTGAACCAACAGGAAATGATGATGGTGGAATAGATGATGATCTACAAGCTAGGTTAGATAACCTGAGAAAAATGTGA 675 0.4074 MSFLFGSRKTPAELLRENKRMLDKSIREIERERQGLQSQEKKLIAEIKKNAKQGQMGAVRVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGDAMKGVTKAMGQMNRRMNLPSLQKIMQEFERQNEKMELVSEVMGDAIDDALEGDEEEEETEDLVNQVLDEIGIDINSELLNAPASTSVAAPAVKNRVAHAEPTGNDDGGIDDDLQARLDNLRKM 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00693 224 Coils Coil 119 139 - -
Trre15g00693 224 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 4 222 IPR005024 GO:0007034
Trre15g00693 224 Pfam Snf7 17 184 IPR005024 GO:0007034
Trre15g00693 224 Coils Coil 12 46 - -
Trre15g00693 224 Gene3D - 6 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00693 Trre-Chr15 5178605 5180905 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00693 K12191 - cit:102610845 356.681