Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00687 ATGTCTTTGATCCGAAGAAGAAAAGGTTCGGAACCAGAAAAGGGTCAGAGTGAAAATTCAGAACCAAAAATTCAGAAGAAAGAAGGAGAAGAAGAAATAGAAGATGATGATAATGACAAGAACAAAAAGAACAAGAAGAATAAGAATAAGAATGATGTTGATTTGTTGAAAAAGAGTACTAAGTGGTCTTGTATTGATGGTTGTTGTTGGTTTGTTGGTTGCATTTGTACGTTATGGTGGTTTTTGTTGTTCATGTATAATGTTATGCCTGCTTCATTTCCTCAGTATGTAACTGAAGCTATTACTGGTCCTATGCCTGATCCACCTGGTCTTAAACTTAAGAAGGAAGGGCTTAGCGCGAAGCATCCGGTGGTTTTTGTGCCGGGGATTGTTACTGGTGGGCTTGAACTTTGGGAGGGTCATCAGTGTGCTGAAGGGTTGTTTAGAAAGAGGTTATGGGGTGGTACTTTTGGAGAAGTTTACAAAAGACCTTCATGTTGGGTGGAGCACATGTCCTTGGACAATGAAACAGGATTGGATCCACCTGGCATAAGAGTAAGGCCTGTCTCTGGACTTGTAGCTGCTGACTACTTTGCTGCCGGATACTTTGTTTGGGCCGTTCTAATTGCTAACTTGGCACGCATTGGTTATGAAGAAAAAACCATGTACATGGCTGCATATGATTGGAGAATATCATTTCAGAACACTGAGGTGCGAGATCAAACACTAAGTCGGATAAAAAGCAACATAGAACTTATGGTTGCTACTAATGGCGGAAATAAGGCGGTTATTATTCCACATTCAATGGGGGTTTTGTATTTTCTTCATTTCATGAAATGGGTGGAAGCACCAGCTCCTATAGGAGGTGGTGGAGGACCTGATTGGTGTTCCAAATATATTAAGGCAGTTGTAAACATTGGTGGACCATTTTTAGGTGTTCCAAAGGCTATAGCAGGGCTTTTCTCAGCCGAAGCCCGAGATATTGCTGTTGCCAGGGCGATTGCACCGGGATTTTTAGATAACGATATGTTCCGCCTTCAAACATTGCAACATGTTATGAAGATGACTCGCACTTGGGACTCAACAATGTCAATGATACCAAAAGGAGGGGACATCATATGGGGTGGTCTTGATTGGTCACCTGAAGAGGCCTGCCGCCTTAATATGAAAAAGCAAAACAGTGACTATACTCAGTTGCCAGACGAAGAGACAAATAAAACACATGTTAACTATGGAAGAATGATATCATTTGGTAGAGATGTCGCAGAGGCAGATTCGTCTACGATTGAAATTGTTGAATTTCGGGATGCAATTAAGGGTCCAAATATTGCAAATACCACTTGTCGTGATGTGTGGACCGAATATCATGACATGGGAGTTGAGGGAGTAAGAGCAATTGCAGATCATAAAGTTTATACAGCTGGCTCAATCATAGACCTACTTCACTTTGTTGCTCCGAAAATGATGGAGCGTGGTGGTGCTCATTTCTCTTATGGAGTAGCTGACAATTTAGATGATCCTAAATATGAACACTACAAATATTGGTCAAACCCCTTGGAAACAAAATTACCAAATGCTCCTGATATGGAAATTTTCTCTCTATATGGAGTTGGCCTACCGACTGAAAGAGCTTATATTTACAAGTTATCTCACTTTGCCGAGTGTTACATTCCTTTTGAAATTGATCCTACGGCTGATGGTGGTTCCGAAGTTAGTTGTCTGAACGATGGTGTCTACACTGTTGATGGTGATGAGACTGTTCCAGTTCTAAGTTCAGGCTACATGTGTGCTAAAGGTTGGCGTGGAAAAACAAGATTCAACCCTTCAGGAATCCGCACTTATGTTCGAGAGTACGATCATTCTCCTCCGGCCAACTTACTAGAAGGAAGAGGAACACAAAGCGGTGCTCATGTTGATATAATGGGAAATTTTGCGTTGATTGAAGATGTTATGAGGGTCGCAGCAGGAGCCAAAGGAGAAGATTTGGGAGGCGATAGGGTGTATTCTGATATCTTTAAATGGTCCGACAGAATCAAGTTACCTTTGTGA 2049 0.4163 MSLIRRRKGSEPEKGQSENSEPKIQKKEGEEEIEDDDNDKNKKNKKNKNKNDVDLLKKSTKWSCIDGCCWFVGCICTLWWFLLFMYNVMPASFPQYVTEAITGPMPDPPGLKLKKEGLSAKHPVVFVPGIVTGGLELWEGHQCAEGLFRKRLWGGTFGEVYKRPSCWVEHMSLDNETGLDPPGIRVRPVSGLVAADYFAAGYFVWAVLIANLARIGYEEKTMYMAAYDWRISFQNTEVRDQTLSRIKSNIELMVATNGGNKAVIIPHSMGVLYFLHFMKWVEAPAPIGGGGGPDWCSKYIKAVVNIGGPFLGVPKAIAGLFSAEARDIAVARAIAPGFLDNDMFRLQTLQHVMKMTRTWDSTMSMIPKGGDIIWGGLDWSPEEACRLNMKKQNSDYTQLPDEETNKTHVNYGRMISFGRDVAEADSSTIEIVEFRDAIKGPNIANTTCRDVWTEYHDMGVEGVRAIADHKVYTAGSIIDLLHFVAPKMMERGGAHFSYGVADNLDDPKYEHYKYWSNPLETKLPNAPDMEIFSLYGVGLPTERAYIYKLSHFAECYIPFEIDPTADGGSEVSCLNDGVYTVDGDETVPVLSSGYMCAKGWRGKTRFNPSGIRTYVREYDHSPPANLLEGRGTQSGAHVDIMGNFALIEDVMRVAAGAKGEDLGGDRVYSDIFKWSDRIKLPL 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00687 682 FunFam Phospholipid:diacylglycerol acyltransferase 1 168 356 - -
Trre15g00687 682 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 19 676 - -
Trre15g00687 682 Gene3D alpha/beta hydrolase 157 356 IPR029058 -
Trre15g00687 682 Pfam Lecithin:cholesterol acyltransferase 148 642 IPR003386 GO:0006629|GO:0008374
Trre15g00687 682 SUPERFAMILY alpha/beta-Hydrolases 120 627 IPR029058 -
Trre15g00687 682 MobiDBLite consensus disorder prediction 1 48 - -
Trre15g00687 682 Coils Coil 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00687 Trre-Chr15 5091806 5096850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00687 164 682 Acyl Lipid Metabolism Gene Families AT5G13640 77.395 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00687 K00679 - gmx:100812643 1195.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00687 15 5091806 5096850 Trre15g00687 15 5091806 5096850 ECH