Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00629 ATGGCTTCGAAATCTCTTCTAAAAAATGTACCTGCATTGTTCAATCGATTATCACTATCAAATTCAAAATCGCTTCTGAAATCCAATCACCAACAACCTTACCTTTTCCCTTCAATTTCCAAAATCCAAAATATTCCTCAAAACGACGCCGAATCGGTGAAGAAGCTTCTTTCATCTGAAGGGTTTCTCTACCCATGTGGCCTCCCTTGTCTTCGCTTCTTCTTTCCTAATGGGGATAATTCTTCATCAGAAGATCCAATGATTTTATTCCCCAAAAGGACATTTCAACCTAGCACTATCCGGCGAAAGAGGAATCATGGTTTTTTTGCTCGGAAGGCAACCAAGGGTGGCAGAAAGGTTATTGCTCGAAGAATAGCTAAGGGTCGGTTTAGGATTACAGCTTAG 405 0.4074 MASKSLLKNVPALFNRLSLSNSKSLLKSNHQQPYLFPSISKIQNIPQNDAESVKKLLSSEGFLYPCGLPCLRFFFPNGDNSSSEDPMILFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRFRITA 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00629 134 ProSitePatterns Ribosomal protein L34 signature. 92 111 IPR020939 GO:0003735|GO:0005840|GO:0006412
Trre15g00629 134 Hamap 50S ribosomal protein L34 [rpmH]. 91 134 IPR000271 GO:0003735|GO:0005840|GO:0006412
Trre15g00629 134 FunFam Mitochondrial ribosomal protein L34 89 134 - -
Trre15g00629 134 Pfam Ribosomal protein L34 92 134 IPR000271 GO:0003735|GO:0005840|GO:0006412
Trre15g00629 134 Gene3D - 90 134 - -
Trre15g00629 134 NCBIfam 50S ribosomal protein L34 92 134 IPR000271 GO:0003735|GO:0005840|GO:0006412
Trre15g00629 134 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN 34 FAMILY MEMBER 1 134 IPR000271 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00629 Trre-Chr15 4578358 4581701 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00629 K02914 - cave:132186045 161.384