Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00628 ATGAATATATTCTCTACTATTTGGTTATTGCCTCTCTTCACATTCATTTATGTCAATAGTATTCTTTCTATTGAAGCTACTCACCATGATTATAGAAACCTTCAGAGTTTATCTTCTCATGATTCCAAAACAAATCAACCCTACAGAACTGCTTATCATTTCCAACCTCCCAAGAATTGGATCAATGGACCAATGATTTACAAGGGACACTATCATCTATTCTATCAATATAATCCTAAAGGTGCAGTTTGGGGAAATATAGTGTGGGCACATTCAATTTCAACTGATCTTGTTAACTGGACCCCACTAGATCCAGCCATCTTTCCATCTCAACCGTCAGATATAAATGGTTGTTGGTCAGGATCAGCCACAATATTACATGGTAACAAACCAGCTATTTTGTACACTGGAATTAATAAATTTAATCAACAAGTTCAAAATATAGCATACCCTAAAAATTTAAATGACCCTTTTCTTAGGGAATGGATTAAGTCACCAAAAAATTCATTAATGGAACCAACTATTGAAAATAAAATTAATGCAAGTTCATTTAGAGATCCTACTACTGGTTGGTTAGGAAAAGATGGACATTGGAGAATACTTGTTGGTAGCAAAAAAAATACTAGAGGAATTGCAATTTTGTATAAGAGTAAAGATTTTATTAATTGGATTAAATCAAAACACCCTTTGCATTCAGCTAAGGGTACTGGAATGTGGGAGTGTCCTGATTTTTTTCCTGTTTTGAAAATTGGTAAATTTGGTGTTGACACATCATTAAATAATAATGGTGTTAGGCATGTTTTGAAGGTTAGTTTAGACGATAAAAAACATGATTATTATTTAATTGGAAGTTATAATGAAGATAAAGACAAATTTACCCCTGATCAAGGGTTTGAGGAAGTTAGTAGTGAACATGTTTTGAGATATGATTATGGAAAATATTATGCTTCAAAAACTTTCTTTGATTATGGGAAGAATCGAAGGATTTTGCTTGGTTGGGCTAATGAATCTTCAAGTGTTCCTGATGATATCAAGAAAGGATGGTCTGGAATCCATACAATTCCAAGGGCTATTTGGTTGCACAAGTCAGGAAAACAGTTAGTACAATGGCCAGTTGTGGAAGTTGAGAAGCTACGAGTAAATCATGTTAACTGGCCCACCAAATTTCTCAAGGGAGGTGAATTGCTACAAATTAATGGTGTCACACCTGCACAGGCTGATGTTGAAATTTCATTTGAAGTGAATAACATTGGAAAGGCTGAAGTTTTGGACAAGTGGACAGACCCACAAATTCTATGTAGCCAAAGTTCATCAAGGAAAAATGGATTAGGACCTTTTGGTTTGCTTGTTTTTGCTTCAAAGGGATTGAAAGAGTTCACATCAGTGTTTTTTAGAATATACAAACACCAACAAAAACCTTTGGTACTCTTTTGTAGTGACCAAAGCAGGTCTTCTTTGAATAAAGATAATGATTTGACCACTTATGGGACTTTTATTGATGTGGATGTTCTTCATGAGAAGCTCTCATTGAGAAGTTTGATTGATCACTCTGTGGTAGAGAGTTTTGGAGGAGAAGGGAGAGCATGCATCACATCCAGAGTTTATCCCACACTGGCCATCAATGATAAAGCACTACTTTATGCTTTCAATAATGGAACTACTGATGTAAAGATCACAAGATTGAGTGCATGGAGCATGAAGAAAGCAGAATTAAATGGAAAGTTATAA 1728 0.349 MNIFSTIWLLPLFTFIYVNSILSIEATHHDYRNLQSLSSHDSKTNQPYRTAYHFQPPKNWINGPMIYKGHYHLFYQYNPKGAVWGNIVWAHSISTDLVNWTPLDPAIFPSQPSDINGCWSGSATILHGNKPAILYTGINKFNQQVQNIAYPKNLNDPFLREWIKSPKNSLMEPTIENKINASSFRDPTTGWLGKDGHWRILVGSKKNTRGIAILYKSKDFINWIKSKHPLHSAKGTGMWECPDFFPVLKIGKFGVDTSLNNNGVRHVLKVSLDDKKHDYYLIGSYNEDKDKFTPDQGFEEVSSEHVLRYDYGKYYASKTFFDYGKNRRILLGWANESSSVPDDIKKGWSGIHTIPRAIWLHKSGKQLVQWPVVEVEKLRVNHVNWPTKFLKGGELLQINGVTPAQADVEISFEVNNIGKAEVLDKWTDPQILCSQSSSRKNGLGPFGLLVFASKGLKEFTSVFFRIYKHQQKPLVLFCSDQSRSSLNKDNDLTTYGTFIDVDVLHEKLSLRSLIDHSVVESFGGEGRACITSRVYPTLAINDKALLYAFNNGTTDVKITRLSAWSMKKAELNGKL 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00628 575 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 39 571 - -
Trre15g00628 575 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 383 566 - -
Trre15g00628 575 SUPERFAMILY Concanavalin A-like lectins/glucanases 371 568 IPR013320 -
Trre15g00628 575 SUPERFAMILY Arabinanase/levansucrase/invertase 44 372 IPR023296 -
Trre15g00628 575 Pfam Glycosyl hydrolases family 32 C terminal 374 565 IPR013189 -
Trre15g00628 575 Gene3D Glycosyl hydrolase domain; family 43 57 381 IPR023296 -
Trre15g00628 575 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 57 383 - -
Trre15g00628 575 SMART glyco_32 53 526 IPR001362 GO:0004553|GO:0005975
Trre15g00628 575 Pfam Glycosyl hydrolases family 32 N-terminal domain 53 371 IPR013148 -
Trre15g00628 575 CDD GH32_Fruct1-like 59 360 - -
Trre15g00628 575 Gene3D - 382 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00628 Trre-Chr15 4560942 4565038 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00628 65 572 Glycoside Hydrolase AT3G13790 65.184 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00628 K01193 - gmx:547681 919.457