Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00624 ATGGTGGTTACATCTATTCGTCTTCTTCCTTCTTCCCTCACATCCTTCGTTCAGCATCGCTCTCCTTACTCATGGCGCCGTTGGCATCCTTCTTCCACCTCATTTCCACTCTCTCCAATTCACTCCACTATTTCTTCCAATGGAATTATTGGTGATGTTGATGATCAATCACAAGTTATATTCATCGGTACTGGTACTAGTGAAGGGATTCCCAGAGTTAGCTGTTTAACTAATCCTTCAAATCAATGTCAGGTTTGTTTAAAAGCTGCTAATCCGAGTGATAGGAATAGGAGACTTAACACAAGCATCCTTGTTCGTCACTCAAACTCCACAGGAACACACAATATTCTTATAGATGCTGGAAAATTTTTCTATCACAGTGCTCTTCGGTGGTTTCCGGAATTTGGGATAAGAACAATTGATGCAGTTATTATTACTCATTCTCATGCTGATGCAATTGGAGGTCTTGATGATCTTAGAGACTGGACTAACAATGTTCAGCCTTCTATTCCAATTTATGTAGCCAAGCGCGACTTTGAGGTGATGAAGAAGACCCATTATTATTTAGTAGATACAAGTGTAGTCTTACCTGGTGCTGCAGTCTCAGCATTGCAATTCAATAGTATATCTGAAGAACCATTTTTTGTACATGGATTGAAGTTTACTCCACTACCAGTGTGGCATGGCAAAGGTTATCGGTCCCTTGGTTTCCGTTTTGGTAATATATGTTATATAAGTGATGTCAGTGATATTCCTGAAGAAACTTATCCACTTTTGAAGGGCTGTGAACTTCTAATCATGGATGCTTTGAGGCCTGATCGTTCTTCAGCTACACATTTTGGACTTCCAAGGGCCTTAGACGAAGTGCGAAAAATTCAACCCAAAAGGACACTTTTTACTGGTATGATGCATCTAATGGATCATGAAGAAGTGAATGCCTACCTTACAAAATTATTGGAGTCCGAGGGCCTTGATGCGCAACTGAGCTATGATGGGCTTTGTGTAGCAGTCAAACTCTAA 1020 0.4049 MVVTSIRLLPSSLTSFVQHRSPYSWRRWHPSSTSFPLSPIHSTISSNGIIGDVDDQSQVIFIGTGTSEGIPRVSCLTNPSNQCQVCLKAANPSDRNRRLNTSILVRHSNSTGTHNILIDAGKFFYHSALRWFPEFGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQPSIPIYVAKRDFEVMKKTHYYLVDTSVVLPGAAVSALQFNSISEEPFFVHGLKFTPLPVWHGKGYRSLGFRFGNICYISDVSDIPEETYPLLKGCELLIMDALRPDRSSATHFGLPRALDEVRKIQPKRTLFTGMMHLMDHEEVNAYLTKLLESEGLDAQLSYDGLCVAVKL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00624 339 Pfam Beta-lactamase superfamily domain 114 300 IPR001279 -
Trre15g00624 339 CDD metallo-hydrolase-like_MBL-fold 58 269 - -
Trre15g00624 339 Gene3D - 53 338 IPR036866 -
Trre15g00624 339 SUPERFAMILY Metallo-hydrolase/oxidoreductase 58 337 IPR036866 -
Trre15g00624 339 SMART Lactamase_B_5a 99 302 IPR001279 -
Trre15g00624 339 PANTHER HYDROLASE C777.06C-RELATED-RELATED 58 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00624 Trre-Chr15 4525097 4529813 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00624 - - gmx:100786919 543.117