Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00584 ATGACAACAACCTATGGCACAATCCCAACATCACCAACACCACCAAAACTCGAATACATAACACGTGGTAAACAAAGAATCAAAGCCGGCTTAGGAACTCGTCGACCGTGGAAAACCATGTTCGATCTCCGGTCACTCGGTATCCCCACGAGTGGCCTACCGGAAGCTATTTCACGGATTCGTGTCAACATATCATACTTCCGTATGAACTACACTATGGTGATGCTTCTGATCTTGTTTCTGAGTCTTTTATGGCACCCGATATCGCTTATTGTTTTCGTTCTTCTCATGGCGGCGTGGTTGTTTTTCTACTTCCTTCGTGATCAGCCGGTAATTCTATGGGGTCGACTTGTTGATGATCGGCTTGTGGCTGTTTTCATGGCGTTTGTTACGGTTGGACTGTTGCTTCTTACGCAAGCTACAGTTAATATTGTTGTTGCGGTTTGTGTCGCGGTTGTGGTTGTCGTAGCACATGCTGTATTTAGGAAGACAGAGGATTTGTTCTTTGAGGAAGAAGAAGAAGTTATCGTTTCTGTTGCTTCTTGA 546 0.4487 MTTTYGTIPTSPTPPKLEYITRGKQRIKAGLGTRRPWKTMFDLRSLGIPTSGLPEAISRIRVNISYFRMNYTMVMLLILFLSLLWHPISLIVFVLLMAAWLFFYFLRDQPVILWGRLVDDRLVAVFMAFVTVGLLLLTQATVNIVVAVCVAVVVVVAHAVFRKTEDLFFEEEEEVIVSVAS 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00584 181 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 1 173 IPR004895 -
Trre15g00584 181 Pfam PRA1 family protein 31 171 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00584 Trre-Chr15 4188513 4189058 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00584 K20359 - gmx:100789765 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00584 15 4188513 4189058 Trre15g00584 15 4188513 4189058 ECH