Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00560 ATGTCTAATATTGTGATTGTTTTCGATTTTGACAAAACTATCATTGATTGTGATAGTGATAATTGGGTTATTGATGAATTAGGTTTCACTGATTTGTTTAATCAGCTTCTTCCAACCATGCCTTGGAACTCTCTCATGGACAAGATGATGATGGAGCTTCATTCAAATGGTATAACCATTGAAGAAATTGAAAAGGTTCTTCATAGGATTCCAATTCATCAGAGAATAATACCTGCAATCAAATCAGCTCATGCTTTAGGGTGTGATTTAAGGATTGTGAGTGATGCAAATATGTTTTTCATTGAAACAATTTTGAAGCAATTGGGAATAAGTGAATGCTTCTCAGAGATTAACACTAATCCTGGTTATGTTAATCAAGAAGGAAGATTAAGAATTTTGCCTTATCATGATTTCAATAAGGCTTCACATGGTTGCCCTATCTGTCCTCCAAATATGTGCAAGGGTTTGATCATAGATAGAATCCAAAGTTTAATTTCTGAAGATGATAATAATAAGAGGTTTATCTATCTTGGTGATGGTATTGGAGATTATTGTCCTAGCTTAAGGCTTAAAGAGAGAGATTTCATGATGCCAAGAAAGAATTTTTCAGCTTGGGACTTGATATGCAAAGATCCTTCACTTCTTAAGGCTGAAATTCATGGTTGGAGTGATGGAGAAGAGCTAGAACAAGTTTTGATGAAGTTGATTAACAAAATTATGATAGAGGAAAATGCTCAATTCATTTCTTCTGATTGCAAACTACAATCTCTATCAATTCCTGTTCATGAAAATTTGCCAAAAGCTCTATCAGTTAGGCCATAG 822 0.3394 MSNIVIVFDFDKTIIDCDSDNWVIDELGFTDLFNQLLPTMPWNSLMDKMMMELHSNGITIEEIEKVLHRIPIHQRIIPAIKSAHALGCDLRIVSDANMFFIETILKQLGISECFSEINTNPGYVNQEGRLRILPYHDFNKASHGCPICPPNMCKGLIIDRIQSLISEDDNNKRFIYLGDGIGDYCPSLRLKERDFMMPRKNFSAWDLICKDPSLLKAEIHGWSDGEELEQVLMKLINKIMIEENAQFISSDCKLQSLSIPVHENLPKALSVRP 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00560 273 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 244 IPR016965 GO:0016791
Trre15g00560 273 NCBIfam HAD-IB family phosphatase 5 188 - -
Trre15g00560 273 PIRSF PLP_phosphatas_PHOSPHO2 1 240 IPR016965 GO:0016791
Trre15g00560 273 Pfam Putative Phosphatase 4 236 IPR016965 GO:0016791
Trre15g00560 273 Gene3D - 1 190 IPR023214 -
Trre15g00560 273 SUPERFAMILY HAD-like 4 190 IPR036412 -
Trre15g00560 273 NCBIfam MtnX-like HAD-IB family phosphatase 3 200 IPR006384 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00560 Trre-Chr15 3965654 3967190 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00560 K13248 - gmx:100782134 476.092