Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00537 ATGTTTCTGCCAACTACTGGAGTAGGGATGAATTCTGCCATAGATGATATGAATTTGATTCAACAAGCACAGAGGCATCACTTGGTTGTGAGGGAGATTGGTGAAGAGATTGATTTAGAAATTGGACCAGGAGACGATGATCCTTCATTTGGTAATACAACACTAAACTGTGCACCGTTGCGGGAATGTTCTACGGAAGAGCACGGTGAGAGGAAGCAGATGGTGGTGGTTTCTCAGCTTTCAAACGATGCTCAAGATATGTCTCAGACCCAACAGGGGAAAAGGAAGAAAAAAGTTGTTAAAAGATGGAGAGAGGAATGGGCAGATACCTACAAATGGGCTTATGTCGATGTGAAAGACGGGACACCAAGGATTTTCTGCTCTGTCTGCAGGGAATTTGGCCGGAAACATCGAAGAAATCCTTATGGGAATGAGGGCAGTCGTAATATGCAGATGAGTGCTCTCGAAGAACACAATAACAGTTTGCTTCATAAAGAAGCTCTTCGTCTTCAATCGGCCTCCAAAGATAAAATTATGGCAGACAAGCCCGTTTATGTAAAAGCGGGGTCAATTCTTGAAGCTACACTAAAAAGGGATCCTCATGAGGTTGAATTCATTCAGGCAGTCCAGGAGGTAGTTCAAGCTCTTGAGAGAGTCATCGGGAAAAATGCTCATTATGTTAACATCATGGAGCGATTGTTGGAACCTGAACGAATGATTATTTTTCGAGTTCCATGGGTGGATGATAGGGGTGAGACACACGTTAATCGGGGGTTTCGGGTACAATTTAACCAGTCAATGGGGCCATGCAGAGGTGGCATTCGTTTTCATCCGTCGATGAATTTAAGTATTACCAAATTCCTTGGCTTTCAGCAGACCTTAAAGAATGCTTTGTCACCTTACAAATTAGGAGGTGCAGCTGGTGGAAGTGATTTTGATCCAAAAGGAAAAACTGATAATGAGATTATGCGATTTTGCCAGAGTTTCATGTGTGAGATGTATCATTACCTTGGTCCTGACAAGGACCTTCCATCAGAGGAGATGGGCGTTGGTACTCGCGAGATGGGGTATCTTTTTGGACAGTATAGACGTCTAGTTGGTCATTTTCAGGGAACTTTTACAGGTCCAAGAATTTTTTGGTCTGGCTCCAGTCTTAGACCTGAAGCTACTGGCTATGGGCTGGTTTTCTTTGCCCAGCTCATGCTAGCTGACATGAATAAAGAACTCAAAGGATTAAGATGTGTAGTGAGTGGTTCTGGAAAGATTGCATTGCATGTTTTAGAGAAGCTAATTGCATATGGTGCTCTTCCCATTACAGTATCGGATTCTAGGGGATATTTAGTTGACGAAGATGGATTTGACTACATGAAAGTACAATTTTTGAGAGATATCAAAGCTCAACATAGAAGTTTGCGAGACTATTCAAAGACCTATGCCCGGTCCAAATATTACGATGAAGCAAAACCCTGGATTGAAAGGTGCGATCTTGCATTTGCTTGTGCAACACAGAATGAGATTGATCAATCTGATGCCATGAATTTGGTTAATTCAGGCTGTCGTATACTAATTGAAGGTTCAAACATGCCATGTACCCCTGATGCAGTTCAAGTTCTGAGGAAAGCTAATATTCTTGTTGCTCCTGCAATGGCTGCTGGTGCTGGAGGGGTTGTGGCTGGAGAACTTGAATTGAATCATGAGTGCAGTTTGATGAACTGGTCACCAGAGGACTTTGAATCTAAATTGCAGGAAGCAATGAAACAGACATATCAAAGAGCTATAAAAGCTGCAACTGATTTTGGTTATCAAAAAGAAAGCCCCGAGGCTTTGGTGCATGGAGCAGTTATCTCTGCCTTTCTAACTATTGCTCAAGCCATGACTGATCAAGGCTGTGTATAA 1896 0.4256 MFLPTTGVGMNSAIDDMNLIQQAQRHHLVVREIGEEIDLEIGPGDDDPSFGNTTLNCAPLRECSTEEHGERKQMVVVSQLSNDAQDMSQTQQGKRKKKVVKRWREEWADTYKWAYVDVKDGTPRIFCSVCREFGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQSASKDKIMADKPVYVKAGSILEATLKRDPHEVEFIQAVQEVVQALERVIGKNAHYVNIMERLLEPERMIIFRVPWVDDRGETHVNRGFRVQFNQSMGPCRGGIRFHPSMNLSITKFLGFQQTLKNALSPYKLGGAAGGSDFDPKGKTDNEIMRFCQSFMCEMYHYLGPDKDLPSEEMGVGTREMGYLFGQYRRLVGHFQGTFTGPRIFWSGSSLRPEATGYGLVFFAQLMLADMNKELKGLRCVVSGSGKIALHVLEKLIAYGALPITVSDSRGYLVDEDGFDYMKVQFLRDIKAQHRSLRDYSKTYARSKYYDEAKPWIERCDLAFACATQNEIDQSDAMNLVNSGCRILIEGSNMPCTPDAVQVLRKANILVAPAMAAGAGGVVAGELELNHECSLMNWSPEDFESKLQEAMKQTYQRAIKAATDFGYQKESPEALVHGAVISAFLTIAQAMTDQGCV 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00537 631 FunFam NADP-specific glutamate dehydrogenase 190 233 - -
Trre15g00537 631 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 190 375 IPR046346 -
Trre15g00537 631 Gene3D - 388 553 - -
Trre15g00537 631 Gene3D Glutamate Dehydrogenase, chain A, domain 3 190 233 - -
Trre15g00537 631 Gene3D Glutamate Dehydrogenase, chain A, domain 3 560 631 - -
Trre15g00537 631 Pfam Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 382 629 IPR006096 GO:0006520|GO:0016491
Trre15g00537 631 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 236 363 IPR006097 GO:0006520|GO:0016491
Trre15g00537 631 FunFam Glutamate dehydrogenase 234 369 - -
Trre15g00537 631 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 293 307 IPR006095 GO:0006520|GO:0016491
Trre15g00537 631 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 394 IPR006095 GO:0006520|GO:0016491
Trre15g00537 631 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 551 562 IPR006095 GO:0006520|GO:0016491
Trre15g00537 631 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 414 434 IPR006095 GO:0006520|GO:0016491
Trre15g00537 631 FunFam NADP-specific glutamate dehydrogenase 561 631 - -
Trre15g00537 631 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 382 629 IPR036291 -
Trre15g00537 631 PANTHER NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED 142 631 - -
Trre15g00537 631 FunFam Glutamate dehydrogenase 388 553 - -
Trre15g00537 631 Gene3D Leucine Dehydrogenase, chain A, domain 1 234 369 - -
Trre15g00537 631 SMART ELFV_dehydrog_3 383 629 IPR006096 GO:0006520|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00537 Trre-Chr15 3797625 3804303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00537 218 509 EF-hand Containing Proteins AT5G07440 29.110 4.97e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00537 K00262 - gmx:100788009 1146.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00537 15 3797625 3804303 Trre15g00537 15 3797625 3804303 ECH