Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00532 ATGGGTAGTTCTGGAGAATCTAACATCAATGGAATAAATGCTTCTGTGGGTGGTTTGGTTTGGGTTCGACGGCGAAATGGGTCATGGTGGCCGGGTAGAATAATGAGTCTTGATGAATTGTCTGAGGGTTGTTTGGTTTCTCCAAGATCGGGTACTCCTGTTAAGCTGTTAGGTCGTGAGGATGCTAGTGTGGATTGGTATAACCTTGAAAAATCAAAGCGGGTAAAGGCTTTTCGTTGTGTAGAGTATGCTGAATGCATTGAGAAGGCGAAGGCATCTGCTGCTGGTTTAGGCAAGAAGGCGGTGAAATATGCTCGAAGGGAAGATGCTATTCTTCATGCTCTTGAACTAGAGAGTGCTCACTTGGACAAGGTACCCTTACCGTTATGCTCCAGATCAGATAAATCTGTCAGTGAACACGGTGAATCAGCTGGAGGATTACCCGCTATGTCTAATTCTGGTGATGGCAATGAGGATGTGACTGATGATTTGAGTGACTCTGAAGACAATTCTAATTCAGCTCCGGAATTGTCACAATCTGGTATATCTTTTGAAGAACCTAATCATAATGGTTCTTTAAAGATTCAACCTATGCAGGGAAGGAGGAGGAGAACACCTAATGATTCAGAAGACGATGGAACTGAAGGAGTGAAGCGAATGAGAGGACTTGAGGACATCGGCATTGGTGTAGTGTCGAAGAGAAAGGGCCAGGACTCAGCAGGTCCATCCGAGATAGCTCAGCATGTCAGTGCTTCCCTCAACGACTCAATCACAGGGAATGGTCTGGAAAATGGAACTTCTGTAAACGGTGTCAAGGCTTATTCTTCTCTGAAACGGAAGAGATCACAAGTGACAAATGCTCATGAACTCTTGAAAAGAAAAAATCGACGCCGGCCTTTGACAAAGGTTTTAGAGAGTACTGTCATGGTATCAGTTCCTGTCACTTGTGATCAGCTTCCTGGTTCAAGAAGTTCTCCACCATGCGGGATAACTGATGGAAAGATTTCAGGATTAGATTCTACTGATTCAAAGAAAAGTTCTGCAATGGAAATTAACAATTTAGATAGTGCTGCCGAGGCTGCTTGTGAGAATGCTACTTCTTTAACTGTTCATGACCAGGGTAGTAATTTTCCCCAAATCAATCACAAGGTCGAGGAGAATGAAACTTCGGAAATGCCAGGACTTGCTGGCAATGATTCTTCTGATATATTATTTGATGTGCCATTTGTTGGGATAGAGGAGGAGAAACTCACTCCAGGTTTGTCACCCACACTTGTTTCTTGCTCATCTGGCATGCCTCAAGTTAGTGCGTTGGAACAACAATCTTGCCAAGCTAGTCAATCGGAAGCTTTTCCATTGATAAATGGGTTTAAGAATGAATCTGGTAGTACCAGTTCAGCTGTTGGTCACGATATTGTTGGCGATGGAGCAGAAAAAGATAGTTCAAAGTGGCAGTCAAAAGGAAAGAGAAATTTAAGACATACAAGTAAAAATAGAAAACAAGTCTCGAGAAAATATATTGGAATGGATGGCGAATCCAAAGCTTATTTAACAGGAACAAGGAACTCGGATGGATTCTGTGAAGGTGCTGGTCAGAAACAGAAAGTTGATTGGAATGGCACAGGTGTATCCAATGCCTCGTATAATTGTACTTCCCAAATCAAGTGCAAGCCAGTTGCTGAAGGTCAAGCAGAAGGATTTCAGGACTTGATCAAACATATCAGGGGTACAGCAGCAGAACCACCTCAGAGATCACTTCCTTATCGCCAGTCACGCTTCACCCTTAACTCCAGATATGAAATGGCAGATTTTCCTGGAAGAAACTGTATTGACGGGACATTATACAATGTTAAACTAGAAGCTAAATCCAGCTACCGGCCACAACATGTTCCTTTGGTTTCTCTTATGAGTAAATTGAATGGCAAAGCCATTATTGGACACCCTTTGACAGTTGATGTATTGGAGGATGGTCATTGCGATAAAATGTTGAACAGCAGTGGAGGCGACGTGGAAGTTGGTGATATTTATTGTGAGGTGAAGCCAAAACCAGTAACCAGAAGAATACCTTCTAAGAAATCCTCACGTTTTTCACGTAGGAAATCTTCGAAGTCAAAGAAATCTGGGCTGTTGAATAAAAAAATCCGGAAGCTGTCCTCGTTGACAGGTCAGAGAAAGTCAGAAGAGGAGAGAAAACCGGTGGTAGATAAGCACAAGGGTCCTGTTATAGCTTGTATTCCTCTTACAATAGTATTCAGTAGGATACATGAGGCAGTGAGCGGTCAGGCGCGGTCGACACACCGTTCAGTATCAGCAACCAACAACCCATGA 2328 0.4308 MGSSGESNINGINASVGGLVWVRRRNGSWWPGRIMSLDELSEGCLVSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCVEYAECIEKAKASAAGLGKKAVKYARREDAILHALELESAHLDKVPLPLCSRSDKSVSEHGESAGGLPAMSNSGDGNEDVTDDLSDSEDNSNSAPELSQSGISFEEPNHNGSLKIQPMQGRRRRTPNDSEDDGTEGVKRMRGLEDIGIGVVSKRKGQDSAGPSEIAQHVSASLNDSITGNGLENGTSVNGVKAYSSLKRKRSQVTNAHELLKRKNRRRPLTKVLESTVMVSVPVTCDQLPGSRSSPPCGITDGKISGLDSTDSKKSSAMEINNLDSAAEAACENATSLTVHDQGSNFPQINHKVEENETSEMPGLAGNDSSDILFDVPFVGIEEEKLTPGLSPTLVSCSSGMPQVSALEQQSCQASQSEAFPLINGFKNESGSTSSAVGHDIVGDGAEKDSSKWQSKGKRNLRHTSKNRKQVSRKYIGMDGESKAYLTGTRNSDGFCEGAGQKQKVDWNGTGVSNASYNCTSQIKCKPVAEGQAEGFQDLIKHIRGTAAEPPQRSLPYRQSRFTLNSRYEMADFPGRNCIDGTLYNVKLEAKSSYRPQHVPLVSLMSKLNGKAIIGHPLTVDVLEDGHCDKMLNSSGGDVEVGDIYCEVKPKPVTRRIPSKKSSRFSRRKSSKSKKSGLLNKKIRKLSSLTGQRKSEEERKPVVDKHKGPVIACIPLTIVFSRIHEAVSGQARSTHRSVSATNNP 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00532 775 MobiDBLite consensus disorder prediction 462 502 - -
Trre15g00532 775 Pfam PWWP domain 18 107 IPR000313 -
Trre15g00532 775 SUPERFAMILY Tudor/PWWP/MBT 15 119 - -
Trre15g00532 775 CDD PWWP 17 108 - -
Trre15g00532 775 MobiDBLite consensus disorder prediction 318 343 - -
Trre15g00532 775 Gene3D - 7 118 - -
Trre15g00532 775 PANTHER T17B22.17 PROTEIN-RELATED 1 770 IPR044679 -
Trre15g00532 775 MobiDBLite consensus disorder prediction 167 195 - -
Trre15g00532 775 MobiDBLite consensus disorder prediction 473 487 - -
Trre15g00532 775 MobiDBLite consensus disorder prediction 133 221 - -
Trre15g00532 775 MobiDBLite consensus disorder prediction 201 221 - -
Trre15g00532 775 MobiDBLite consensus disorder prediction 687 710 - -
Trre15g00532 775 ProSiteProfiles PWWP domain profile. 16 71 IPR000313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00532 Trre-Chr15 3771383 3775666 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00532 - - cam:101497471 1221.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00532 15 3771383 3775666 Trre15g00532 15 3771383 3775666 ECH