Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00506 ATGAAAGGGGCAATTGATGATGGGAAGGAGATAAGTCCAATGTTTCCTAGGTTACATGTTAAGGATGCAGAGAAAGGAGGGCCAAAAGCACCTCCAAGAAATAAAATGGCTCTCTATGAACAATTCAGTATCCCTTCACAAAGTTTTGCATCAGGAGGACCAGGACCAGGATCATTGTTTTCTCTCCCTCTAAGAAACATTACAGTTCCTACAACTTCAAGCCATCTTGGTTGCAGTACTCAAAGCATCAAGTTCTGCAGCTCGAACGCATCTTCAATCCTATCGGACAAGACTCAAGCTTATAATTCTAGAAAGATTAACTTAACCAAGTTGACAGTGAGCCATGACTTAGAACACATGAAACCTGCAAAACAAGTTACCAAAATTCATCAAGATAATTTCATCAATAGTAGTAAGAATTATCTGAAAAAACTTGATGGTGACGATGCTTTTATAATTCCCGGTTCTGTACATGTGAAAAGTTCATGTTCCGGTAACATCCATAATGACAAAGATGAAGAAGATAGAATCGCTCGTTGCAATTTGAGTTGTTCGCTTAAAAGTCTAAATTCATTTAGAAAGGTGATGAACTCACATGGAGATATAGAACTAAAATCGGCACAATATGGGAAGAACCAAATGGAAGAACATAAAGATGAGAGCCAAATTGATCAGAAGGCAGAAGAGGAAAAACCTTCTCACTCATTAATTGGTTTTGATGAGACTACAAATGCTTCTTTAAACTCATCGATTAATGATAGGAATTCTGAATCAAAGAAGAAAGAACATAGATTCATGAAGGAAGAAACAACTAAAAATATTTCACTAGATAGCTTGAAAACATTGCAAGGTAGCAATGGTCTAAGACATGAAGATCATGAAGCTTTTGTAGACAAAATCAATGTAAGGGATCATTGCATGGAGAATACAGCAATGAGTGATGTCCAAAAATGTTCCGGTGAGTTAGAAATCGGTAGAAGGTCCTTACATGGTAAGAGAGAAAGGAATAAAGACGAGGAGACTAGTAGAAATTACGACGCGTTGAATAAATCCAGCTCAGAATGTAGATTTGGTATCGATATCAACCCTGACGATGTCGTAGGACTTATAGGTGAAAAGCAATTTTGGAAAACAAGAAGAACCATCATCAATCAACAGAGAATCTTCTTCATGCAAGTGTTTGAGTTGCATAGACTTATAAAGGTGCAACGATTAATTGCAGGATCGCCACATCTATTGTTCGAAGATAACCTTGTACTTCACAAACCGCCGATAAAAACATCCTCTCCGAAGGAGTTACAATCTGACTTTGTCGGTGAACAACCATCGACGGCTTTTAAACTCGACAGTAAGTCCGAGAAGGCTACTACTTCCGAGGATGTTGAAAACAATGCAGTTGGAAAGATTTCCTTTCCTTGTGCCAACAACATAAGCAAAGAACATAATCACATTTCAAGTTATAGCAATCATCATTTCGGAAACCTTGCATTAGCCTCTGCAGATAAAAATTCCAATTCCAATTCTAATTCGAAACAGTCTCCGAGCATTGTCTACCCTCCACCACCTCCACCGCCGCCTAACCAATGGTTAGTTCCTGTCATGTCTCCATCTGAAGGTCTTGTATATAAGCCAATCATTGGACCATGCCCTCCAAATGCGGGCGGCATCATGACACCATTATACGGCGCGTGCAGTTCAATGAGCTTCAATCCAGGAAGCAAAGATGTTTTAGATCCATCTCTTACTACAAGTTTTCATCAAAAGATTCGAATCCTTTCTGGTACGTCATTACCACCATTATTACCGCCACCACCATGTGTTCCATCATTCATGCATAGATCAATATCAGCTTCATCGATTGAACAAATGGGACAATCTAATGGTCCTAAAAACCACTACTCATCTACAGAATTCAATTCAGCCATATTATATCAAAATCCATCAAACATGTCCACTCAGATAAGCCAAGTAATGTCAAGAAATTTTCCAACTTATCAAACAATGGAAGATAATAAAGAACTACAAATAAGTACAGCTAGTAGTCCATCCAAGAGAATCAAAAGAGATGAACTTCCTTTGTTTCCAGTGGCACCGACTTTTTGGTCATCACCGGATCGTGACTCGAGTGTTGAACATCACTCAAGAGTAATAAAAGCTCTTCCTCATAATCCAAAATCAGCAAGTGAATCTGCAGCCAAGATATTCAAGTCAATACAAGAAGAAAGGAAATTTTTTTGA 2238 0.3843 MKGAIDDGKEISPMFPRLHVKDAEKGGPKAPPRNKMALYEQFSIPSQSFASGGPGPGSLFSLPLRNITVPTTSSHLGCSTQSIKFCSSNASSILSDKTQAYNSRKINLTKLTVSHDLEHMKPAKQVTKIHQDNFINSSKNYLKKLDGDDAFIIPGSVHVKSSCSGNIHNDKDEEDRIARCNLSCSLKSLNSFRKVMNSHGDIELKSAQYGKNQMEEHKDESQIDQKAEEEKPSHSLIGFDETTNASLNSSINDRNSESKKKEHRFMKEETTKNISLDSLKTLQGSNGLRHEDHEAFVDKINVRDHCMENTAMSDVQKCSGELEIGRRSLHGKRERNKDEETSRNYDALNKSSSECRFGIDINPDDVVGLIGEKQFWKTRRTIINQQRIFFMQVFELHRLIKVQRLIAGSPHLLFEDNLVLHKPPIKTSSPKELQSDFVGEQPSTAFKLDSKSEKATTSEDVENNAVGKISFPCANNISKEHNHISSYSNHHFGNLALASADKNSNSNSNSKQSPSIVYPPPPPPPPNQWLVPVMSPSEGLVYKPIIGPCPPNAGGIMTPLYGACSSMSFNPGSKDVLDPSLTTSFHQKIRILSGTSLPPLLPPPPCVPSFMHRSISASSIEQMGQSNGPKNHYSSTEFNSAILYQNPSNMSTQISQVMSRNFPTYQTMEDNKELQISTASSPSKRIKRDELPLFPVAPTFWSSPDRDSSVEHHSRVIKALPHNPKSASESAAKIFKSIQEERKFF 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00506 745 MobiDBLite consensus disorder prediction 210 236 - -
Trre15g00506 745 MobiDBLite consensus disorder prediction 428 451 - -
Trre15g00506 745 MobiDBLite consensus disorder prediction 254 269 - -
Trre15g00506 745 MobiDBLite consensus disorder prediction 1 33 - -
Trre15g00506 745 MobiDBLite consensus disorder prediction 425 461 - -
Trre15g00506 745 MobiDBLite consensus disorder prediction 499 523 - -
Trre15g00506 745 MobiDBLite consensus disorder prediction 209 269 - -
Trre15g00506 745 MobiDBLite consensus disorder prediction 1 29 - -
Trre15g00506 745 MobiDBLite consensus disorder prediction 237 253 - -
Trre15g00506 745 MobiDBLite consensus disorder prediction 499 514 - -
Trre15g00506 745 Coils Coil 211 231 - -
Trre15g00506 745 PANTHER PROTEIN EARLY FLOWERING 3 1 743 IPR039319 GO:2000028
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00506 Trre-Chr15 3629155 3632325 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00506 K12125 - gmx:100820110 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00506 15 3629155 3632325 Trre15g00506 15 3629155 3632325 ECH