Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00500 ATGGCAAGTGTTCTAGGTTTTTCTTCAACCATTGTTACTTCTTATGAATCTAGGAATGAACCAAAACTATGTACTAAATTCTCTGCAAAAACTTGTTCCACACTATGTTTTTCTTGGATTAACTACCATGGAAAGATGGGTAGAAAACATTTTCAGCTCAGATCCTCAAATGGGCATCCCTTAAATGCTGTTTCTTCTCATGATGGTTTAGCTGCAAGTTCATTGGCCAAAGAAGATGGCCAGCCTCAACAAGTTGAAGAATCATTTTCCTTTTCAGACTCTGCATCCACAGGACCAAACCTTAGTATAACTGTTGTTGGAGCTTCTGGAGACCTTGCCAAAAAGAAGATTTTTCCAGCACTCTTTGCTCTTTTTTATGAAGATTGGCTACCTGAGAATTTTATTGTGTTTGGATATGCCCGGACTAAAATGACCGATGAAGAGTTAAGGAACATGATAAGCCAAACTTTAACATGCAGAATTGACAAGAGGGCAAATTGTGCAGATAAAATGGATCAATTCTTGAAAAGATGCTTTTACCATTCTGGTCTGTATAATTCTGAGGACGACTTTCTAGATTTGGATTCCAAACTGAAAGAGAAAGAGGGTGGAAGACTTTCAAATAGGTTGTTTTATTTGTCAATACCTCCAAACATATTTGTGGATGTGGTGAGATGTGCTAGCCTCAAAGCTTCTTCAAAAAATGGCTGGACAAGGGTTATTGTTGAAAAGCCGTTTGGTCGTGATTCTGAATCCTCTAGTGAGCTAACAAGAAGTTTGAAGCAGTACCTCACTGAAGACCAAATATTCAGGATTGACCATTACTTGGGTAAGGAGCTTGTGGAGAATCTCTCTGTGCTTCGATTTTCAAATCTTGTTTTTGAGCCTCTATGGTCTCGGAATTACATTCGTAATGTGCAGTTCATATTTTCTGAAGATTTTGGGACAGAAGGAAGAGGAGGTTATTTTGATAACTATGGAATCATTCGTGATATAATGCAAAATCACCTTGTGCAAATACTGGCACTGTTTGCAATGGAACCACCTGTCAGCTTGGATGCTGAGGACATCAGAAATGAGAAGGTGAAGGTTCTGAGATCAATGAAACCAATACTGCTTGAAGATGTTGTAGTTGGTCAATATAAGGGCCACAGCAAGGGTGGTAGATCCTATCCTGCTTATATAGATGACCCAACTGTTCCAAAGGGTAGCCTTACTCCAACATTTGCTGCAGCGGCTCTTTTTATTGGCAATGCCAGATGGGATGGAGTTCCTTTTCTCATGAAAGCCGGCAAGGCTCTTCATACTAAACGTGCAGAAATCAGAGTACAATTCAGACATGTCCCGGGTAACTTGTACAAGAGGAACTTTGGAACTGATCTCGACAAAGCTACAAATGAGCTTGTGCTTCGTGTGCAACCCGATGAAGCTATATATTTGAAGATCAATAACAAAGTTCCTGGTCTTGGAATGCGATTAGATAGAAGTGACCTGAATTTGCTTTACCGATCAAGATATCCAAGAGAAATACCAGATGCATATGAAAGGTTACTTTTAGATGCTATTGAAGGCGAACGAAGGCTGTTCATCAGAAGTGATGAACTTGATGCAGCTTGGGCACTATTCACTCCTTTGTTAAAAGAAATTGAAAACAAGAAGATTGCTCCAGAGCTTTATCCTTATGGTAGCAGAGGACCAGTTGGAGCACACTACCTTGCTGCCAGGCACAATGTAAGATGGGGAGATCTTGGTGGAGATGACTGA 1764 0.4019 MASVLGFSSTIVTSYESRNEPKLCTKFSAKTCSTLCFSWINYHGKMGRKHFQLRSSNGHPLNAVSSHDGLAASSLAKEDGQPQQVEESFSFSDSASTGPNLSITVVGASGDLAKKKIFPALFALFYEDWLPENFIVFGYARTKMTDEELRNMISQTLTCRIDKRANCADKMDQFLKRCFYHSGLYNSEDDFLDLDSKLKEKEGGRLSNRLFYLSIPPNIFVDVVRCASLKASSKNGWTRVIVEKPFGRDSESSSELTRSLKQYLTEDQIFRIDHYLGKELVENLSVLRFSNLVFEPLWSRNYIRNVQFIFSEDFGTEGRGGYFDNYGIIRDIMQNHLVQILALFAMEPPVSLDAEDIRNEKVKVLRSMKPILLEDVVVGQYKGHSKGGRSYPAYIDDPTVPKGSLTPTFAAAALFIGNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRVQPDEAIYLKINNKVPGLGMRLDRSDLNLLYRSRYPREIPDAYERLLLDAIEGERRLFIRSDELDAAWALFTPLLKEIENKKIAPELYPYGSRGPVGAHYLAARHNVRWGDLGGDD 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00500 587 Gene3D Dihydrodipicolinate Reductase; domain 2 272 581 - -
Trre15g00500 587 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 105 283 IPR022674 GO:0006006|GO:0016614|GO:0050661
Trre15g00500 587 PRINTS Glucose-6-phosphate dehydrogenase signature 239 252 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre15g00500 587 PRINTS Glucose-6-phosphate dehydrogenase signature 315 332 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre15g00500 587 PRINTS Glucose-6-phosphate dehydrogenase signature 420 446 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre15g00500 587 PRINTS Glucose-6-phosphate dehydrogenase signature 263 291 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre15g00500 587 PRINTS Glucose-6-phosphate dehydrogenase signature 333 349 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre15g00500 587 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 97 286 IPR036291 -
Trre15g00500 587 Gene3D - 98 271 - -
Trre15g00500 587 FunFam Glucose-6-phosphate 1-dehydrogenase 272 581 - -
Trre15g00500 587 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 100 582 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre15g00500 587 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 286 580 IPR022675 GO:0004345|GO:0006006|GO:0050661
Trre15g00500 587 NCBIfam glucose-6-phosphate dehydrogenase 101 581 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre15g00500 587 ProSitePatterns Glucose-6-phosphate dehydrogenase active site. 273 279 IPR019796 GO:0004345|GO:0006006
Trre15g00500 587 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 92 580 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre15g00500 587 PIRSF G6PD 80 584 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre15g00500 587 FunFam Glucose-6-phosphate 1-dehydrogenase 97 271 - -
Trre15g00500 587 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 273 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00500 Trre-Chr15 3577150 3582893 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00500 K00036 - gmx:100801945 1025.39