Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00465 ATGTATAGAGCTACAGCTTCATCACTCAAGAGGCATCTCAAGGGCCGTGGTGGCAACTTGGGAGCAACTAGGTTTGCTACTTCAAGTGCTGTAGCTGCAAAAGTTTCCTCTGGTGGTTTGTTTAGTTGGCTTACCGGGGAGCGTTCTAGTTCACTTCCACCTCTCGATACACCACTTAGTTCTGTTGTTCTTCCTGATCCGCTACCAGATTATGTTGAACCAAGCAAGACTAAGATTACAACTCTTTCCAATGGACTTAAAATTGCTTCAGAGACCTCGTCGAACCCTGCAGCCTCAATTGGGTTATATATCGATTGTGGTTCAATCTATGAGACACCATTGTCAAGCGGGGCTTCACATTTGCTAGAGAGAATGGCTTTCAAGAGCACGGTTAACCGTAGTCACTTTCGTATTGTAAGGGAAACAGAAGCAATTGGTGGTAACATAGGAGCCTCGGCCTCTCGGGAACAAATGGGTTACACATTTGATGCCTTAAAGACCTATGTTCCACAAATGGTTGAATTACTTATTGACTGTGTAAGGAACCCAGCCTTCTTGGATTGGGAGGTCAATGAAGAGCTACGAAAAGTGAAAGCAGAGCTTGGAGAACTCTCAAACAATCCCCAGGGCTTGCTATTGGAAGCAATTCACTCTGCTGGTTATTCTGGTGCATTGGCTTATCCTCTTTTGGCTCCTGAAGAAGCATTGAACAGATTGGATGGCCCCAGTTTAGAGGAATTCGTTGCTGAAAATTATACAGCTCCTAGAATGGTACTTGCTGCATCTGGAGTAGAGCATGAAGAGCTTCTAGCTGTTGCCGAGCCACTTCTTGCTGACCTGCCAAGTGTTCCCCGTCCCGAAGAACCAAAATCTACCTATGTTGGAGGTGATTTCCGTCGTCACGGTGAAGCAGGGGCTACACATGTTGCTATTGCTTTTGAAGTTCCCGGTGGCTGGCAAAAGGAGAGAGATGCTATAGTTTTGACTGTTCTACAGATGCTTATGGGAGGAGGTGGTTCATTCTCAGCTGGGGGCCCCGGTAAAGGGATGCACTCAAGGCTATTTCTTCGCGTGTTGAATGAATATCAACAGATTCAATCTTTTTCTGCATTCAACAGTATCTTCAACAATACAGGATTATTTGGCATCTATGCTAGCACTAGCCCTGATTTTGCACCAAAAGCTGTAGATTTAGCTGTCAGAGAACTAATATCAATTGCAACACCAGGACAAGTTTCACAGATACAGCTTGAACGTGCCAAGCAATCCACAAAATCTGCAGTTCTTATGAATCTGGAATCTAGAATGATCGCCTCAGAAGACATAGGAAGGCAGATTTTGACTTACGGAGAAAGGAAACCTTTGGAGCAGTTCCTGAAGGCTGTAGATGAAATCACTTTAAATGATATCACTAAAATTTCTAAAAAGATTATTTCCTCACCTTTGACTATGGCATCATATGGAGATGTTATTAATGTGCCGAGTTATGAAACTGTGAGCCGCATGTTCCATGCGAAATGA 1521 0.4398 MYRATASSLKRHLKGRGGNLGATRFATSSAVAAKVSSGGLFSWLTGERSSSLPPLDTPLSSVVLPDPLPDYVEPSKTKITTLSNGLKIASETSSNPAASIGLYIDCGSIYETPLSSGASHLLERMAFKSTVNRSHFRIVRETEAIGGNIGASASREQMGYTFDALKTYVPQMVELLIDCVRNPAFLDWEVNEELRKVKAELGELSNNPQGLLLEAIHSAGYSGALAYPLLAPEEALNRLDGPSLEEFVAENYTAPRMVLAASGVEHEELLAVAEPLLADLPSVPRPEEPKSTYVGGDFRRHGEAGATHVAIAFEVPGGWQKERDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLFLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTSPDFAPKAVDLAVRELISIATPGQVSQIQLERAKQSTKSAVLMNLESRMIASEDIGRQILTYGERKPLEQFLKAVDEITLNDITKISKKIISSPLTMASYGDVINVPSYETVSRMFHAK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00465 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 76 286 IPR011249 GO:0046872
Trre15g00465 506 FunFam Mitochondrial-processing peptidase subunit beta 67 282 - -
Trre15g00465 506 ProSitePatterns Insulinase family, zinc-binding region signature. 107 130 IPR001431 GO:0004222|GO:0006508
Trre15g00465 506 Pfam Peptidase M16 inactive domain 243 422 IPR007863 -
Trre15g00465 506 Gene3D - 291 502 - -
Trre15g00465 506 Gene3D - 69 278 - -
Trre15g00465 506 Pfam Insulinase (Peptidase family M16) 88 232 IPR011765 -
Trre15g00465 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 298 497 IPR011249 GO:0046872
Trre15g00465 506 PANTHER METALLOPROTEASE 70 494 - -
Trre15g00465 506 FunFam mitochondrial-processing peptidase subunit alpha 291 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00465 Trre-Chr15 3354262 3358766 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00465 K01412 - gmx:100794691 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00465 15 3354262 3358766 Trre15g00465 15 3354262 3358766 ECH