Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00464 ATGAAGACACTCCTTTTCTTTTTTGTAACACTCCTAGCAACATGTCATGGTGATGTTCTAAATGTAAACCATGAACATGGTTCAACCTACAAAATTTTCCCTCTACGAATGAAAACAGGTTCAGGTGGACACTACATTCCAGAAGTGTCATGTTCTAGTTGGAGACTTGGTGTTGAAGCACACAACATCATTGACTGGAAAACTGTTCCTATTGAGTGTGAAAATTATGTTGGGAACTATGTATTAGGTGACCAATATAGAGCTGACTCTAAATTTGTTAACCGTGAAGGTTATTTTTATGCTAAGACTGTTAACGTTGTTGGAGATGGTAAAGACATTTGGGTGTTTGACATTGATGAAACTACTCTTTCTAATCTTCCTTATTATGCTAAACATGGATTTGGGGTGAATCCATACAACGACACATTGTTCAATGAATGGGTTGATCTTGGAGCAGCACCAGCATTACCAGAGTCTCAAAAATTGTACAAAAAATTATTGTCTCTTGGTATCAAGATTGTTTTCTTAACAGGAAGACCACTCAAACAAAAGGACATTACTGCTAAGAACTTGAAAAAAGCTGGCTATCACACATGGGAAAAGCTCATTTTAAAGGACACAACAATATATCATGGTAAAACAGCAGTTTCATACAAATCATCAGAGAGAAAGAAGTTGGAGGAAGAAGGATACAGAATAATTGGAAACATTGGAGATCAATGGAGTGATATTCTTGGAACAAGCACTGGCAGTAGGACTTTCAAGCTCCCTGATCCCCTCTACTACATTGCCTAA 795 0.3723 MKTLLFFFVTLLATCHGDVLNVNHEHGSTYKIFPLRMKTGSGGHYIPEVSCSSWRLGVEAHNIIDWKTVPIECENYVGNYVLGDQYRADSKFVNREGYFYAKTVNVVGDGKDIWVFDIDETTLSNLPYYAKHGFGVNPYNDTLFNEWVDLGAAPALPESQKLYKKLLSLGIKIVFLTGRPLKQKDITAKNLKKAGYHTWEKLILKDTTIYHGKTAVSYKSSERKKLEEEGYRIIGNIGDQWSDILGTSTGSRTFKLPDPLYYIA 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00464 264 PIRSF VSP 1 264 IPR014403 -
Trre15g00464 264 NCBIfam plant acid phosphatase 48 264 IPR010028 GO:0003993
Trre15g00464 264 Gene3D - 46 264 IPR023214 -
Trre15g00464 264 SUPERFAMILY HAD-like 105 247 IPR036412 -
Trre15g00464 264 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 43 263 IPR005519 -
Trre15g00464 264 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 13 263 - -
Trre15g00464 264 CDD HAD_VSP 77 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00464 Trre-Chr15 3349178 3352028 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00464 - - gmx:547669 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00464 15 3349178 3352028 Trre15g00464 15 3349178 3352028 ECH