Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00463 ATGAAGATCTTGATTTTCATTTTTGTTACACTCTTAGTAACATGTCATTGTAATGTTGAGCATGGTTCAACCAACAAAATTTTCCCACTCCGATTGAAAACTGGTTCAGGTGGACACTACATTCAAAAAGTGTCATGTTCTAGTTGGAGACTTGGTGTTGAAGCACACAACGTTAGAGATTGGAAAACTATTCCACAAGAATGTGAAAAATATGTTGGGAACTATATGTTAGGTGATCAATATAGAGCTGACTCTAAAACGGTTAACGATGAAGGTTATTCGTATGCTAAGAGTCTCAATCTAATTAGTAGAGATGGTAAAGATATATGGGTTTTTGACATTGATGAAACTTCATTGTCTAATCTTCCATATTATGCTAAACACGGATTTGGGGTGAACTCATTCAACGAGACATCGTTTAATGAATGGGCTGATCTTGGAGCAGCACCAGCACTGCCTGAGTCTAAAAAATTGTACAACAAATTGTTGTCTCTTGGTATCAAGATTGTTTTCTTAACAGGAAGACCACTCAAACAAAAAGAGATGACTGCTAAGAATTTGAGACAAGCTGGCTACCACACATGGGAAAAACTAATTTTAAAGGATACAGCGAAATATCATGGTAAGACAGCAGTTACATATAAATCATCAGAGAGAAAGAAGGTAGAGGAAGAAGGATACAGAATCATTGGAAACATTGGAGATCAATGGAGTGATATTCTTGGAACCAACATTGGCAATAGAACTTTCAAGCTTCCTGATCCCCTCTACTACATTGCCTAA 783 0.3665 MKILIFIFVTLLVTCHCNVEHGSTNKIFPLRLKTGSGGHYIQKVSCSSWRLGVEAHNVRDWKTIPQECEKYVGNYMLGDQYRADSKTVNDEGYSYAKSLNLISRDGKDIWVFDIDETSLSNLPYYAKHGFGVNSFNETSFNEWADLGAAPALPESKKLYNKLLSLGIKIVFLTGRPLKQKEMTAKNLRQAGYHTWEKLILKDTAKYHGKTAVTYKSSERKKVEEEGYRIIGNIGDQWSDILGTNIGNRTFKLPDPLYYIA 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00463 260 CDD HAD_VSP 72 259 - -
Trre15g00463 260 Gene3D - 41 260 IPR023214 -
Trre15g00463 260 NCBIfam plant acid phosphatase 41 260 IPR010028 GO:0003993
Trre15g00463 260 SUPERFAMILY HAD-like 104 243 IPR036412 -
Trre15g00463 260 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 5 259 - -
Trre15g00463 260 PIRSF VSP 1 260 IPR014403 -
Trre15g00463 260 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 38 259 IPR005519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00463 Trre-Chr15 3341035 3343605 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00463 - - gmx:547669 402.905