Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00459 ATGGGAAAAGTGGTTGTTTGTGCGACGGTGATCGGAGCTACGGCGGCATGTGCGGTGGCGACAGTATTGATACATCGTTACGTGAAGAAATCGAAGCGATGGGGAAAAGCAAAAGCGATTCTGAAGGAATTTGAAGAAAAATGCGCGACACCGTCGTTGAAGCTGAAGCAGGTTGCTGATGCAATGACGGTGGAGATGCACGCCGGTCTTGCTTCTGAAGGTGGTAGCAAGCTCAAAATGCTCATCAGTTTCGTTGATAATCTCCCTACAGGGAATGAGGAAGGACTATATTATTCCTTGGACCTTGGAGGGACTAACTTTCGTGTATTGCGCGTTCAACTCGGTGGCAAGGATGGTGTTATTAATCCAGAATTTACCGAGGTGTCGATTCCTGCTAATTTGATGGTCGGGACATCAAGTGAACTCTTCGACTATATTGCAGCAGAACTTGCAAAGTGGACAAAAGGCTTCAGCATCGATGATGCAGTTGGTAAGGATGTTGTGGCGGAATTGAGAAGTGCCATTGAGAGACAAGGTCTTGATATGCACATAACAGCTTTGGTCAACGATACAGTTGGGACATTAGCCGGAGGCCGACATACAAACAAGGATGTCATTGCTGCTGTAATTTTAGGTACCGGAACAAATGCAGCGTATGTGGAGAGTGCTCAAGCAATACCAAAATGGCACGGTGATTTGCCAAAGTCCGGAGAAATGGTTATCAACATGGAGTGGGGAAACTTCCGGTCATCCCATCTTCCATTAACTGAGTATGATTATGCATTAGATGCTGAGAGTTTAAACCCTGGTGAACAGATTTTTGAGAAGATAATATCCGGAATGTACTTGGGAGAAATTGTTCGCAGAGTACTATACAAAATGGCTGAAGAAGCTTTGATTTTTGGTGAAACTGTTCCTCCAAAACTGAAAGTTCCATTCATATTAAGGACACCTGACATGTCTGCCATGCATCATGACTCATCTGCTGATCTCAGTGTGGTCAAAAGCAAATTGAAGGACATTTTGGAGGTATCTGATACCTCCCTGCAAGTGAGAAAGGTGGTTGTTGAGCTGTGCAACATTGTTGCTACCCGTGGTGCTCGTCTTGCTGCTGCTGGCATCTTAGGAATTCTGAAGAAGTTAGGAAGAGACACCATCAGCAGCGTTGAGGGCCAGAAGAGTGTGATAGCCATGGATGGTGGATTGTATGAGCATTACACTGAATACAGCAAGTGCTTAGAGAATACCTTAACAGAGTTGGTTGGTGAAGATGTTTCAGGAAGTGTTGTTATCGAACACTCTAATGATGGTTCAGGAATTGGTGCTGCACTTCTTGCTGCTTCTCATTCTCATTACCTTGATGAATTAAGAAAAAGTAGAAACTTTGGTTGTGTTTGTGCCAACAAGGCAAAGGAGAATCTCACCAAGTTTGATAAAATCTATGCCTAA 1449 0.4417 MGKVVVCATVIGATAACAVATVLIHRYVKKSKRWGKAKAILKEFEEKCATPSLKLKQVADAMTVEMHAGLASEGGSKLKMLISFVDNLPTGNEEGLYYSLDLGGTNFRVLRVQLGGKDGVINPEFTEVSIPANLMVGTSSELFDYIAAELAKWTKGFSIDDAVGKDVVAELRSAIERQGLDMHITALVNDTVGTLAGGRHTNKDVIAAVILGTGTNAAYVESAQAIPKWHGDLPKSGEMVINMEWGNFRSSHLPLTEYDYALDAESLNPGEQIFEKIISGMYLGEIVRRVLYKMAEEALIFGETVPPKLKVPFILRTPDMSAMHHDSSADLSVVKSKLKDILEVSDTSLQVRKVVVELCNIVATRGARLAAAGILGILKKLGRDTISSVEGQKSVIAMDGGLYEHYTEYSKCLENTLTELVGEDVSGSVVIEHSNDGSGIGAALLAASHSHYLDELRKSRNFGCVCANKAKENLTKFDKIYA 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00459 482 SUPERFAMILY Actin-like ATPase domain 204 455 IPR043129 -
Trre15g00459 482 SUPERFAMILY Actin-like ATPase domain 28 202 IPR043129 -
Trre15g00459 482 ProSiteProfiles Hexokinase domain profile. 35 447 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Trre15g00459 482 Gene3D - 87 148 - -
Trre15g00459 482 PANTHER HEXOKINASE 149 450 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Trre15g00459 482 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Trre15g00459 482 FunFam Phosphotransferase 180 435 - -
Trre15g00459 482 Pfam Hexokinase 41 151 IPR022672 GO:0005524|GO:0005975|GO:0016773
Trre15g00459 482 Pfam Hexokinase 207 447 IPR022673 GO:0005524|GO:0005975|GO:0016773
Trre15g00459 482 Gene3D - 149 435 - -
Trre15g00459 482 Gene3D - 23 86 - -
Trre15g00459 482 PRINTS Hexokinase family signature 432 448 - -
Trre15g00459 482 PRINTS Hexokinase family signature 355 377 - -
Trre15g00459 482 PRINTS Hexokinase family signature 98 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00459 Trre-Chr15 3286229 3293067 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00459 K00844 - gmx:100783775 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00459 15 3286229 3293067 Trre15g00459 15 3286229 3293067 ECH