Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00446 ATGCGATCATTAACATTAACGCCGCAAACAATGCCGGAAACCTCCGTCAATTTCCGTGCACCGCCGCCATCTCCAGTTGCCTCCGGTCGTAGATCAACTGTAACAAACAACGAATTTCTAACAGAGTTTTTAGAAACCTCACTTCGAGTTCCAGATCTAGTTTTACCTGACAAGATTTTTCCGAAACAGATCAATCACGAAACACCACCGAAAATCGATTTCGTTTCACTCTGTTTTCATAAAGATGAAGATCTAATCAATGTTGTTTCGGACTCCATAGCTCGATTCGGATGCTTTCAACTTCTCAATCACGGGATTTCGCAGCAACTTATGGCTGCTGCCATTGAGGCTGCCGGGGGAATATTTTTGGTGCCGCCGGGAAAGAGAGACGCCGTGACGCGGTCGCCGGAGAAACTTCGGGGTTTTGAAGAGTATCCTGAAGGAGATGAAGAGGGAAGTGAATTGAATGAAGAATTCATTTGGCGCAAGGATGAAGAGTTGAAGTTGAAAATGGAGGGAATTTGGCCTATTGGATATCCTAATTTTAGCAAGAAGATGGAAACTTTACAATCACGTGTGGAGAAGGTGGCAGACAAAATTTTGCCTATCATATTGAAAAATATTCCTAAAAAATTAGCAAGTAATGGTAACATAATTAGTCATGGAAATGAAGTTGGAACACTTTGTTGCATTTACAAACATCGCCAAGATATTAATAGGAATAATCAATGGGTTGATTCTTTGAAATATGATGTGATTAGAATGCTGATTAGGGGAACTGATTACTCACATTCTTTGTGCTTTCATGTGTGTGATGGCCCTTCAGAGTTTCATGTTTATTCCAAGAAAAGTTGGTTGTCTTTCTGTCCTGAACAAGGTGCTCTTGTAATCACTGCTGGAGATCAAATACAGGTATTGAGTGGTGGACAATACAAGGATGTAATTGGAAAGGCAATCTTTAAAGGAGAAAGAGAAGACAACATTTCAATGGCTTTCCTCTATTCTCCTCAAAACACCAAGAAAAAATTTCAAACCAATAGAGAAAAACCTATTTCACTTGGCCAACAAGCCATCTTGGGTGTAATTTTGAACCTTATGTACCATGTCCTAATTTTTGTCTTGAAAAAAGTTTGA 1134 0.3968 MRSLTLTPQTMPETSVNFRAPPPSPVASGRRSTVTNNEFLTEFLETSLRVPDLVLPDKIFPKQINHETPPKIDFVSLCFHKDEDLINVVSDSIARFGCFQLLNHGISQQLMAAAIEAAGGIFLVPPGKRDAVTRSPEKLRGFEEYPEGDEEGSELNEEFIWRKDEELKLKMEGIWPIGYPNFSKKMETLQSRVEKVADKILPIILKNIPKKLASNGNIISHGNEVGTLCCIYKHRQDINRNNQWVDSLKYDVIRMLIRGTDYSHSLCFHVCDGPSEFHVYSKKSWLSFCPEQGALVITAGDQIQVLSGGQYKDVIGKAIFKGEREDNISMAFLYSPQNTKKKFQTNREKPISLGQQAILGVILNLMYHVLIFVLKKV 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00446 377 Pfam non-haem dioxygenase in morphine synthesis N-terminal 70 164 IPR026992 -
Trre15g00446 377 MobiDBLite consensus disorder prediction 1 17 - -
Trre15g00446 377 Gene3D - 49 357 IPR027443 -
Trre15g00446 377 SUPERFAMILY Clavaminate synthase-like 70 339 - -
Trre15g00446 377 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 10 373 - -
Trre15g00446 377 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00446 Trre-Chr15 3195903 3197782 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00446 - - psat:127076483 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00446 15 3195903 3197782 Trre15g00446 15 3195903 3197782 ECH