Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00434 ATGAAAGATTTAACTTCAAACGAATCTCCATTCCCTAAGCTCTCTATGGACGAGATACTTGAATTGGAACGAATATACATTGATGTGGGAGAAAAATCACTTGATCACAATTTCTGCAAGGATATTGCTACAAGTTTTAGCTCTTCATCAAACAGTGTTGGTAAAAATTCTTTATCATGGGAACAGGTGCAGCAGTGGTTCCAAACTAAACATAGAGAGTCAAAGGGTCAGTTTGCTTCATCACCTGAGGGGCTGAGCCTATTTGTTGATCTTTCGGACAAATATTCGAAAAAGGGACATAAAAGCTCTCCGAAACCAAAAGGTATTCAAGCTGCAGATCTGTCAGAAATGGCATTTGAAGCAATGTCTATAAAAGACAATGCATGGCATGACGTTGCAATGTTTCTGAACTATAGAGTGCTATGCACAGGCGAACTTGAAGCTCGTGTACGCTATCATGGATTCAGTAAGGATGAAGATGAATGGATTAATGTGAAAGATGGGGTGCGGCAAAGATCCATCCCATTGGAAGCTTCAGAGTGTCACAAGGTGAAGGAAGGACATCTAGTACTATGTTTCCTGGAAAAGTCTGATTATGCCCTTTATTGTGATGCTCGCGTTTTGAAAATCGAGAGGAGGGTACACGATAGCAAAGAGTGTAGCTGCATCTTCACCGTCCAGTTTTGCCATGACAAGTCTGAGGAAGAAGTCCGTTGGGACGGTATATGCTGTAGGCCAACACAAGAAGAATCTGAGGCCCCCTTAGAAGCTTTCCTGAACCCCATAGAGACCTTGTGGGGATAG 804 0.4241 MKDLTSNESPFPKLSMDEILELERIYIDVGEKSLDHNFCKDIATSFSSSSNSVGKNSLSWEQVQQWFQTKHRESKGQFASSPEGLSLFVDLSDKYSKKGHKSSPKPKGIQAADLSEMAFEAMSIKDNAWHDVAMFLNYRVLCTGELEARVRYHGFSKDEDEWINVKDGVRQRSIPLEASECHKVKEGHLVLCFLEKSDYALYCDARVLKIERRVHDSKECSCIFTVQFCHDKSEEEVRWDGICCRPTQEESEAPLEAFLNPIETLWG 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00434 267 Gene3D - 176 248 - -
Trre15g00434 267 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 11 256 IPR039276 -
Trre15g00434 267 Pfam SAWADEE domain 116 243 IPR032001 GO:0003682
Trre15g00434 267 Gene3D - 114 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00434 Trre-Chr15 3112581 3116790 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00434 - - gmx:100799110 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00434 15 3112581 3116790 Trre15g00434 15 3112581 3116790 ECH