Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00430 ATGGCACCTCATGGAGAATCTTTGTTATCAACTTCATTAATCTCAAGGAGCAACAGCAAATCAACAAAGCTCTCAAATTCCGACCCCCTTCAAAGAACGATCTCGGACATTTCATTCGATTTGACAAAAGAAATTGATAATTTAAAACTACCACCGATATCTGAAGTTGAATTAGATGCAAAGTGTGAGTGTTGTGGCATGTCCGAGGAGTGCACACCCGAGTACATAGACCGAATTCGCAAGAAATTCGAAGGGAAGTTTGTGTGTGGATTGTGTTCTGAGGCAGTGAAGGAGGAGTTGGTGAAAAATGGTGGGAAAAAATTGGATGAAGCTTTACGTACACATATGAATGCATGTGCTAGGTTTAACAAATATGGTAGGGCTTTTCCTGTTTTGTTTCAAGCTCAAGCTATGAAAGAGATGCTAAAAAAGAGTAACTTAGATGGGAAAGTTAGGGCTAAGTCAATTAGTCCAAGGGACAACAAAGGAGGAGGGCTTGCTCGTAGTTCAAGTTGTATTCCTGCACTTACAAGAGAGATCAACAATATCAAAATAGTCAATTGA 564 0.3972 MAPHGESLLSTSLISRSNSKSTKLSNSDPLQRTISDISFDLTKEIDNLKLPPISEVELDAKCECCGMSEECTPEYIDRIRKKFEGKFVCGLCSEAVKEELVKNGGKKLDEALRTHMNACARFNKYGRAFPVLFQAQAMKEMLKKSNLDGKVRAKSISPRDNKGGGLARSSSCIPALTREINNIKIVN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00430 187 Pfam Protein of unknown function (DUF1677) 59 144 IPR012876 -
Trre15g00430 187 PANTHER OS01G0745000 PROTEIN 57 180 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00430 Trre-Chr15 3059847 3060410 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00430 - - gmx:100816162 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00430 15 3059847 3060410 Trre15g00430 15 3059847 3060410 ECH
Trre11g04709 11 58586355 58587327 Trre15g00430 15 3059847 3060410 PCT