Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00416 ATGGAAACGAGTAGAAGAGCGGTTGAATCGTACTGGAGATCGAGGTTAATCGATTCAGCTACATCAGATGAAGATAAAGTTACACCTGTTTACAAATTGGAAGAAATTTGTGAGCTTTTGCGTTCTTCACATGTTTCTATTGTTAAGGAAGTTTCAGATTTTGTTTTGAAACGTTTGGATCATAAGAGTCCCATTGTAAAACAGAAGGCTTTAAGATTGATAAAATATGCTGTTGGTAAGTCTGGTGCCGAGTTCAGAAGGGAAATGCAGAGACATTCAGTGGCAATTCGTCAATTATTGCACTACAAGGGACAGTTGGATCCTTTGAAAGGCGATGCACTAAATAAGGCTGTACGGGACACTGCTCAGGAGGCTGTCTCTGCCATCTTCTCAGAAGATAATAGTAATAATAATAATAATATTAAGGTCGCCGCACCTTCTCAAGATCTTAACAGGCGGATACAAGGGTTTGGGAATACAAACTATGAACCGCCATCTGATGATAAGAAGTCTTTTATTAGTGAGGTAGTTGGTATTGGAAGTGCGTCAATTAAGCAAGGAATTCACAACTTAACACAAGGACATTCACTAATGAAGAATGAAACTGGAAGTGGAAGCTACAAGAGTCCAAATCTTCAAAGGTCGCTGACCAACGAATCCGAACTTGGTGACAGATATGTACCAGTTGCGTATCGTAGTGAAACTCAGAGTAGTTTTGGACTTCCAAAGAATCAATCTAGTGGTTCTTGGAATCAGGATTCTAGAGTAACTAAGATGGACATTTCAAATGGTGAATCCAGTGGAAATTCTTCAGAGACTAAGACTAGAGAGGATAGGTTGCTGGAGACAATTGTAACTTCAGGAGGTGTTCGTCTACAACCCTCTCGAGATGCCATTCAGGCTTTCCTAACAGAGGCTGCAAAGTTGGATGCCCTAGCTTTAAGTCATGCTCTTGAATTAAAGCTACAATCTCCTATTTGGCAGGTGCGCATGAAAGCTGTTTGTGTTCTTGAGTCCGTTCTCAGAAAGAAGGATGATGAACATTTTTCATATGTGGCATCTTACTTCACTGAAAATAATGACGTCGTGCAGAAATGTTCTGAATCTCCCCAAGCCTCTTTGAGGGAAAAGGCTATAAAGGTTCTTGGTCTTCTAGGTGGAGGCCAGCCAAACAGTTCTGCCATTAATTCAGAGAAAGCTGTGAAGACAGAGCGTCCTGTTGTTGCCGAATTGCCTGACTTGATAGACACTGGCTATTCAAATGATAACACAACTAATACTACAAATGAACAAAGTATAGGGAATTTGACATCATCCGCACCTCTGGTTGATGATTTATTTGGCGATATAAGTAGCTCTATTGGAGCTACTCACGAACTGAAAAATGACGACGACCCATTTGCAGATGTATCATTTCACTCAGGCGAGAGCAAAGAACAACACGCGGATGATCTATTTTCAGGGATGACAGTTGGCGGTGATAAACAGAGTGATCTTGCGAGTCACAAGCAGGGGACTCAAAGTGATCCTCAACTTTTTGATATTTTTGCTTCTAGTTCCAAGCTAGGAAATCATAATGAGTCTGTTGATGATTTAATGGGTGGTTTATCAATAGATGAAAATACCTCAAGTTTGACGAAGCAGAAGGGAACATATTCTACGGTGCAATCTGAATCTTTATTTTCAGGTTTAAACAACCATGCCCCCGAGAATACTCTAGGCGGCATTTTGGGCTCTCACTCTCAGGCTCAGCCAGTTGGGTTCAATGGAAACCCGATGTTTCCCACTGGTCATCAGCCTTATAATATGCAACCTGGTATTATGTTGAACCAGTCATACCCTTCTCAGCCTCTTAATTATGGTGCCATGGGAACTCTCTTAGCTCAGCAACAATTACTCACGACAATGGCTAATTTCCAACACCTTAGTAATGTCAACATGCGAGATGATGGCCTTGCTCAAATGGTTGGACCTAATGGAAATTCACCTTTGCCAGACATATTTCAACCAAATTTTCCATCACAAACTCCCAGCTCAATGATCAATAATTCAAAGAAAGAAGATAATACTAAAGCGTTTGATTTTATCTCGGACCATCTTAACTCTGCTCGTGATTCAAGGAGAGTGATTTGA 2133 0.4088 METSRRAVESYWRSRLIDSATSDEDKVTPVYKLEEICELLRSSHVSIVKEVSDFVLKRLDHKSPIVKQKALRLIKYAVGKSGAEFRREMQRHSVAIRQLLHYKGQLDPLKGDALNKAVRDTAQEAVSAIFSEDNSNNNNNIKVAAPSQDLNRRIQGFGNTNYEPPSDDKKSFISEVVGIGSASIKQGIHNLTQGHSLMKNETGSGSYKSPNLQRSLTNESELGDRYVPVAYRSETQSSFGLPKNQSSGSWNQDSRVTKMDISNGESSGNSSETKTREDRLLETIVTSGGVRLQPSRDAIQAFLTEAAKLDALALSHALELKLQSPIWQVRMKAVCVLESVLRKKDDEHFSYVASYFTENNDVVQKCSESPQASLREKAIKVLGLLGGGQPNSSAINSEKAVKTERPVVAELPDLIDTGYSNDNTTNTTNEQSIGNLTSSAPLVDDLFGDISSSIGATHELKNDDDPFADVSFHSGESKEQHADDLFSGMTVGGDKQSDLASHKQGTQSDPQLFDIFASSSKLGNHNESVDDLMGGLSIDENTSSLTKQKGTYSTVQSESLFSGLNNHAPENTLGGILGSHSQAQPVGFNGNPMFPTGHQPYNMQPGIMLNQSYPSQPLNYGAMGTLLAQQQLLTTMANFQHLSNVNMRDDGLAQMVGPNGNSPLPDIFQPNFPSQTPSSMINNSKKEDNTKAFDFISDHLNSARDSRRVI 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00416 710 MobiDBLite consensus disorder prediction 237 277 - -
Trre15g00416 710 MobiDBLite consensus disorder prediction 415 436 - -
Trre15g00416 710 MobiDBLite consensus disorder prediction 458 481 - -
Trre15g00416 710 CDD ENTH_like_Tepsin 13 132 IPR035802 -
Trre15g00416 710 MobiDBLite consensus disorder prediction 237 270 - -
Trre15g00416 710 PANTHER UNCHARACTERIZED 5 700 IPR039273 -
Trre15g00416 710 MobiDBLite consensus disorder prediction 457 481 - -
Trre15g00416 710 SMART VHS_2 13 154 IPR002014 GO:0035091|GO:0043130
Trre15g00416 710 Pfam ENTH domain 16 129 IPR013809 -
Trre15g00416 710 SUPERFAMILY ARM repeat 33 391 IPR016024 -
Trre15g00416 710 MobiDBLite consensus disorder prediction 417 436 - -
Trre15g00416 710 ProSiteProfiles VHS domain profile. 20 89 IPR002014 GO:0035091|GO:0043130
Trre15g00416 710 MobiDBLite consensus disorder prediction 196 220 - -
Trre15g00416 710 Gene3D - 2 140 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00416 Trre-Chr15 2905637 2911326 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00416 - - gmx:100803368 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00416 15 2905637 2911326 Trre15g00416 15 2905637 2911326 ECH