Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00415 ATGGCTTCATCTCTTCACCAAAACTCCACTTTCCTTAAACCCTATCATTCTCAATTCCCAAAACCCTCAACTTCAACCACCACACGCCGGAGCTATATTCCTGTACGCTGCGGAGGACCGCGTTCCCAGCGTGGACCATTAGTAAGAGGTCGATTCTTAAGCATCGAAGCAATCCAAGCCATTCAAACCCTCAAACGCATCCACCGAACCAAACCACAAGACCAAACCAAACTCCTAACCAACACACTCACTCGTTTAATCAAATCAGATCTAGTCGCTACTCTAAAGGAGCTTCTACGTCAACAACAATGCACCCTCGCTCTTGATGTTTTCTCAGCCGTTAGATCTGAATACGGTGCAGATCTTTCTCTTTATGCTGAAATGGTGCAGGCGCTTGGTAATTGTGATATGGTAGAAGATGTGGACCGTTTGATTGAAGAGGTTGTTGGTGAGGGTGGGATTGGGATTGGGTGGGGTGAGGATCAGGGGAAAGGGCTTTTGAATTTGATTAAGGCGGTTATTGGAGCGAAGAGGAGAGATTCAACGGTTAGGATTTATGAGATGATGAAAGAGAATGGGTGGGGGGAGAGTGTTGAACCTGATGAGTATGTTGTTAAGGTTTTGAGTAATGGGTTTAAGGGTTTTGGTGATGAGGAACTTGCTCAACAGATTTTGAATGATTATGATAGGTTTTGTAAGGCTAAATTTGATGCATTTAGGGTTTAG 726 0.4435 MASSLHQNSTFLKPYHSQFPKPSTSTTTRRSYIPVRCGGPRSQRGPLVRGRFLSIEAIQAIQTLKRIHRTKPQDQTKLLTNTLTRLIKSDLVATLKELLRQQQCTLALDVFSAVRSEYGADLSLYAEMVQALGNCDMVEDVDRLIEEVVGEGGIGIGWGEDQGKGLLNLIKAVIGAKRRDSTVRIYEMMKENGWGESVEPDEYVVKVLSNGFKGFGDEELAQQILNDYDRFCKAKFDAFRV 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00415 241 Gene3D Tetratricopeptide repeat domain 52 232 IPR011990 GO:0005515
Trre15g00415 241 MobiDBLite consensus disorder prediction 1 31 - -
Trre15g00415 241 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 18 233 IPR044190 GO:0000373|GO:0003723|GO:0009658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00415 Trre-Chr15 2901274 2901999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00415 - - cam:101510586 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00415 15 2901274 2901999 Trre15g00415 15 2901274 2901999 ECH