Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00403 ATGGCTCTTACTCCAACAACGATCCTCACTCTCTCTCTTCTTCTCTTGCTTCCGATTCTTTCTTCGACAAAAGTAGTTGAAGAAGAAGAATTTTCTGAGGAGTTGCTACTTAAACCCTTACCCGATCGCAAAATTCTCACGCATTTTCACTTCCAAACTGAAGCTCCTATTTCCGATCATTCCTTCGCTCGTCACCATCACCTCTTTCCCAAATCCATTGCTCAATTGGTTAAGAAATTTCACATTAAAGCAATGGAGTTATCTTTCACACAAGGTCGATGGAATTATGAAAGGTGGGGTGGATTTGATCCAATATCAAGCCAAAATGCAAAGCCTCCTGGAGTTGAATTATGGGCAGTCTTTGACGTCCCTCCACATCAGGTTGATGCTTATTGGAAAAATTTAACCCATTCTCTGTCAGGTCTCTTCTGTGCTTCGATAAACTTCTTAGAGTCTTCTAGCTCTTATTCTGCTCCTAAATGGGCATCTCAGTCAGCGTTAGGTAGTTTAAGATATGGAACACTGCCCCGTGAAGCTGTCTGCACAGAGAATCTTACTCCATGGTTGAAACTCCTTCCTTGTCGAGACAAGGCTGGACTTTCAGGTTTAATGGATAGGCCATCTATTTACAGGAGTTTTTATCATTCACAGCGTTTGCACTTGACAGCTCCTGCAGATGGGTTAGATTCAGGAATTATTCTAGAACAAACACTTACCGTTGTACTTCAGCCTAATATTCAGAGGGCTGGTATAAACTATCCTGATGAAACAAAGATTCAACCAAGCTGGTCCCTAAGCTCAATATTTGGACGAAAAATCAATGGAAGATGTGTTCTTGCTAAATCGAGTAATGTCTACCTTCAAGTTGAGAGAGGTTTAGTCACTCAACTTGAAAATCTTGAGAAGAATACAGTGGCATATGATTCAAATGGCACAGGTACAGAAGTTTTGAGAAGGAATCTTGGCTTTGAATTATCTATTACACCGGATAAGGTTCACAGAGAACTGGAAAAGAGCTCCTCAATTCTGTATGAATATTCAATCAAAGGGTACAATGACACTGAACAATTTGATCTAGGCCTAATATGGAAGTATCCAGTTGTTTGGTCCTCCCCACATGCACCTTTATATGCCAGTAGATTTTTAATGGGAAGTGGAAATGAAAGGGGTTCAATTGCAATATCTTTGAAGTCTACGGAGTTGACTAAGGGCTTCATTGCAGCCAATAACTTTGAAGAGAAGTATGAAAAGCCTCATGCAGTCACGGATTTTGTTGACAAAATGAGTGTTTCACCTTCTGAAGACAAAGTATCACCAGGGGTGATGGAGCTGGTCCTCAAATTTCCTTGTGAGATTAAATCTGCTTTACTAAATATAGAGTTTGATAAGGGCTTCTTGCACATTGATGAATATCCTCCGGATGCTAATCAAGGATTTGACATCCCATCAGCAATAATAAGCTTTCCTGACTTCCATGCCAGTTTGCAATTTCCTAATAACTCTATAAGCAACTCGCCAATGTTGTCTAAATTACAGGAAAAGAGCCCTGTTCTCTCATACACAGAAGTTTTGCTCGTACCCTTGACAACTCCTGATTTCAGTATGCCTTACAATGTTATCACAATTACTTGCACAGTTTTTGCATTGTATTTTGGATCCTTGCTAAATGTACTCCGAAGGCGAGTTGGAGAGGAGGAAAGACTTTTGAAAAACAAAGATGCAAACAAGGCCGCATTCCTTCGTCGAATACTAGATAAATTCAGGGGAAGATCATCAGAGTCCACTCAACCGCAACAACCATCATCATCGTCATCATCATCCTTCATTACTCCAAAATTGTTTCTTAAAGTACTATTGGTTGCAGGAATTGCTGTTATATGGCAATACTACTTGAAATGA 1899 0.4002 MALTPTTILTLSLLLLLPILSSTKVVEEEEFSEELLLKPLPDRKILTHFHFQTEAPISDHSFARHHHLFPKSIAQLVKKFHIKAMELSFTQGRWNYERWGGFDPISSQNAKPPGVELWAVFDVPPHQVDAYWKNLTHSLSGLFCASINFLESSSSYSAPKWASQSALGSLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSGLMDRPSIYRSFYHSQRLHLTAPADGLDSGIILEQTLTVVLQPNIQRAGINYPDETKIQPSWSLSSIFGRKINGRCVLAKSSNVYLQVERGLVTQLENLEKNTVAYDSNGTGTEVLRRNLGFELSITPDKVHRELEKSSSILYEYSIKGYNDTEQFDLGLIWKYPVVWSSPHAPLYASRFLMGSGNERGSIAISLKSTELTKGFIAANNFEEKYEKPHAVTDFVDKMSVSPSEDKVSPGVMELVLKFPCEIKSALLNIEFDKGFLHIDEYPPDANQGFDIPSAIISFPDFHASLQFPNNSISNSPMLSKLQEKSPVLSYTEVLLVPLTTPDFSMPYNVITITCTVFALYFGSLLNVLRRRVGEEERLLKNKDANKAAFLRRILDKFRGRSSESTQPQQPSSSSSSSFITPKLFLKVLLVAGIAVIWQYYLK 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00403 632 PANTHER GPI TRANSAMIDASE COMPONENT PIG-T-RELATED 10 592 IPR007245 GO:0016255|GO:0042765
Trre15g00403 632 Pfam Gpi16 subunit, GPI transamidase component 19 581 IPR007245 GO:0016255|GO:0042765
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00403 Trre-Chr15 2824438 2829087 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00403 K05292 - gmx:100794356 951.044