Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00392 ATGATAAACCCGAATGACCCTGAGGAAAATGTCGATTTAGTTCTTGACAATTCATCGTCTGATCTCCCCCCTCCTTCCAAACCTAGAGCCAATTCAGAGGATCTGTCTGGAAAAGGATCAGTGCGACCAACAATTGAGTCTCATAAGAGTCTTGATGATGGTGATCGTAAGAACTATGTTGACTCTCCAGCTCGTCATGAAAATGTAGGCAATAGGAGTTCCAATGATTCTACACCTCGTCTTGGAGTAGGTTCTGCTGATAGCCGACGTAGACCTTCAAGACAAAGTACTGCTGGATCTGAGTACAGCGTTGAACGATCACCCCTTCATCGTCAGGCTAGAGCTCCTACTGGAAAAGATAGTCCTTCATGGGAAGGAAAAAATTCCTATGACAGCAGCCATGGTACACCAGGAAGGTCTCGATTAAGACCAGCTAATCGAGGGGATGAAACTCCTGATAAAGGAGCAGCTGTTCCAAAGTTTGGTGATTGGGATGTGAGTAACCCTGCATCAGCCGATGGCTATACTCACATTTTCAACAAAGTAAGAGAGGAGAGACAAGGTGGGGCCGGACATGCACCCGGAACACCTAATGAGAGGCCACATGTTATCCGCAACCAAAATAACAGTGGCAAAACCCAGTTTTGCTGCTTTGCTTGGGGGAGAAAATGA 672 0.4628 MINPNDPEENVDLVLDNSSSDLPPPSKPRANSEDLSGKGSVRPTIESHKSLDDGDRKNYVDSPARHENVGNRSSNDSTPRLGVGSADSRRRPSRQSTAGSEYSVERSPLHRQARAPTGKDSPSWEGKNSYDSSHGTPGRSRLRPANRGDETPDKGAAVPKFGDWDVSNPASADGYTHIFNKVREERQGGAGHAPGTPNERPHVIRNQNNSGKTQFCCFAWGRK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00392 223 MobiDBLite consensus disorder prediction 122 136 - -
Trre15g00392 223 MobiDBLite consensus disorder prediction 67 82 - -
Trre15g00392 223 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 114 217 IPR040387 -
Trre15g00392 223 MobiDBLite consensus disorder prediction 89 103 - -
Trre15g00392 223 MobiDBLite consensus disorder prediction 45 63 - -
Trre15g00392 223 MobiDBLite consensus disorder prediction 12 26 - -
Trre15g00392 223 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 152 187 IPR008700 -
Trre15g00392 223 MobiDBLite consensus disorder prediction 1 169 - -
Trre15g00392 223 MobiDBLite consensus disorder prediction 184 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00392 Trre-Chr15 2728357 2729383 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00392 K13456 - gmx:100808509 303.523