Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00352 ATGGGATCAAAGAAGAATTTGGCAGTGAATTTTTTGTCTGGATGGTTGAGTAAGAGATCATTGAAAGTGAAGATCTTTTTGGGAATATTGCTTGCTTTTTGTGCTCTAGTGGTTTTAAAGCACACTATTACAGAACCTGATTTTTTCTACATTGCCTCTGGATCAATCCATGTTGCTGGTCTTGCAATCCTTGTATACAAGCTATTCGTTTACAAGACTTGTTCCGGTTTATCCCTCAAGTTCCAAGAGCTCACAGCTGCATTCCTAGCAATAAGATTAGGTCTTAGCTTCTACATGGAGGCTGACTACCGCACTGTGTTTGATTTCCTATATCTCTTGTTAACTTTAATCATTATTTGGTTGATGAGATTCAGACTCAAATCATCCTATATGAAGGAGTTTGACAACATGTGGTTATCGTTTTTGGTGGTGCCTTCTGCAATTTTGGCAGTACTAATCCAACCAAGGTCACCTCAATATTACTGGATAGCTAGAGTCATTTTTGCATTCACTTTGTATTTGGAAACTGTTGCAATACTTCCTCAAATTCGTTATATGCAAAATGCAAAGATGATTGAAACATTTACGGGATATTATGTATTTGCTCTTGGTGTCTCAAGATTCTTTTCATTGGCATATTGGCTTATTCATATTTATGAAACTCGAGGGAGATATCTATTTTTCTTCGGTTATGGCTATTATTGGATGGTGGCTCTTCAAGTAATAGAGTTTGTTCAGTCATTCATCTTAGCTGATTTTTGTTACTATTACATCAAGAGCTTCATGGAAGGGCAACTTTTGAAGAAGATGCCCGTTTAA 819 0.3663 MGSKKNLAVNFLSGWLSKRSLKVKIFLGILLAFCALVVLKHTITEPDFFYIASGSIHVAGLAILVYKLFVYKTCSGLSLKFQELTAAFLAIRLGLSFYMEADYRTVFDFLYLLLTLIIIWLMRFRLKSSYMKEFDNMWLSFLVVPSAILAVLIQPRSPQYYWIARVIFAFTLYLETVAILPQIRYMQNAKMIETFTGYYVFALGVSRFFSLAYWLIHIYETRGRYLFFFGYGYYWMVALQVIEFVQSFILADFCYYYIKSFMEGQLLKKMPV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00352 272 PRINTS ER lumen protein retaining receptor signature 168 188 IPR000133 GO:0006621|GO:0016020|GO:0046923
Trre15g00352 272 PRINTS ER lumen protein retaining receptor signature 49 68 IPR000133 GO:0006621|GO:0016020|GO:0046923
Trre15g00352 272 PRINTS ER lumen protein retaining receptor signature 190 204 IPR000133 GO:0006621|GO:0016020|GO:0046923
Trre15g00352 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 48 260 IPR000133 GO:0006621|GO:0016020|GO:0046923
Trre15g00352 272 Pfam ER lumen protein retaining receptor 73 216 IPR000133 GO:0006621|GO:0016020|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00352 Trre-Chr15 2439291 2443610 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00352 1 272 Miscellaneous Gene Families AT3G25160 52.747 1.89e-99 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00352 - K10949 gmx:100790733 322.013