Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00351 ATGGGAGCAAAGAGGGATTCCCCTGTGGATGTTTTGACAAGATGGTTTGGGAAGAGATCAATGAAAGTGAAGATCTTTTTGGGGATATTGATTGCTTTTTGTGCTTTGGTGGCTCTCAGGTTTACTATCAAAGAATCAGATTTTTTCTACATAGCTGCTGAATCAATCCATATTGTTGGCCTTATTGCCCTCATATATAAGCTCTTTGCTCACAAGAGTTGCTCTGGTTTATCCCTCAAGAGCCAAGAGATCACAGCTTTATTCCTAGTAACAAGATTAGGTTGTAGCATCTATATGGAGGCTAATGTGCACACTGTGCTGGATACCATATTGCTCTTGTCAACATTATTGGTTATTTGGTTGATAAGATTCAAGTTGAAGTCATCCTATATGAAGGAGTTTGACAACATGTGGTTATCCTTTTTGGTGGTGCCTTCTGCAATATTGGCAATAGTAATCAACCCAATTACAAATCATATATGGATTGCTCGAGTAATTTGGGCATTCACTTCATATTTGGAAACTATTTCAATACTTCCTCAACTTCGTTATATGCAAAATGCAAAGATTGTGGAAACATTCACAGGATATTATGTATTTGCTCTTGGTGTCTCAAGATTCTTTGCACTGGCCTATTGGATTATTTTTACCTATACTACACGAGGCGCATATCTATTTGTGTTTGGCCATGGCTACTTGTGGACGTTGGCAGCTCTTGTATCAGAGATTATTCAATCTTTTATCTTGGCAGATTTTTGTTACTATTATATGAAGAGCTTCATGCAAGGGCAACTTTTGAAGAAGATGCCTGTTTAA 816 0.3762 MGAKRDSPVDVLTRWFGKRSMKVKIFLGILIAFCALVALRFTIKESDFFYIAAESIHIVGLIALIYKLFAHKSCSGLSLKSQEITALFLVTRLGCSIYMEANVHTVLDTILLLSTLLVIWLIRFKLKSSYMKEFDNMWLSFLVVPSAILAIVINPITNHIWIARVIWAFTSYLETISILPQLRYMQNAKIVETFTGYYVFALGVSRFFALAYWIIFTYTTRGAYLFVFGHGYLWTLAALVSEIIQSFILADFCYYYMKSFMQGQLLKKMPV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00351 271 PRINTS ER lumen protein retaining receptor signature 167 187 IPR000133 GO:0006621|GO:0016020|GO:0046923
Trre15g00351 271 PRINTS ER lumen protein retaining receptor signature 76 96 IPR000133 GO:0006621|GO:0016020|GO:0046923
Trre15g00351 271 PRINTS ER lumen protein retaining receptor signature 203 221 IPR000133 GO:0006621|GO:0016020|GO:0046923
Trre15g00351 271 PRINTS ER lumen protein retaining receptor signature 49 68 IPR000133 GO:0006621|GO:0016020|GO:0046923
Trre15g00351 271 PRINTS ER lumen protein retaining receptor signature 189 203 IPR000133 GO:0006621|GO:0016020|GO:0046923
Trre15g00351 271 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 48 259 IPR000133 GO:0006621|GO:0016020|GO:0046923
Trre15g00351 271 Pfam ER lumen protein retaining receptor 73 215 IPR000133 GO:0006621|GO:0016020|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00351 Trre-Chr15 2434226 2436839 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00351 1 271 Miscellaneous Gene Families AT3G25160 55.882 3.63e-108 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00351 - K10949 gmx:100790733 363.229