Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00325 ATGAACTTTGCTAGAAAGAAACGAGTCACCGATCCGTTAAATGATGAAGCAAAAGCACGACTCATTGGCGGTCATCTCCGGCAACTAAGCGGTGTCAGTAGTGGAAGCGATCATTCCGGTACCGGTGAATGTGATTTTTCGCTGTCTCTCTCTGAGCTGGTGCATGGTTTCCTGGAGGAAGATAATGGAAACGAGACTGACTCAGCTGGAAACGATTTCGACTCGGAGCGAGTTGACTCGGTAACCGATCGCATGAACTCGGTGAAGGATCTATTAAAGTCAAGCGCTGAAAACGCTAATGCTGATTCTTACATGAAAATGCTTCGATTACATGTTTCTGAAGCAGCGGTGAAGTTCGCGTTTCTGAAGAAGCAAAACGTTTCGCTTTACAATCGGAACGTGATGTCGTTTTTGCGTGAGAAAGGTTACAATGCTGCGATTTGCAAAACACGGTGGGAATCCTCCGGCGGACTCACCGCCGGCAACCACGAGTTCATCGACGTAGTGCGATCTGAATCGTCCACGTGGCAGAACAATAGGTACTTCGTTGATCTCGATTTCGCCGGTCAATTCGAAATCGCACGTCCGACGAGTCATTACTCGGAGATTCTGAGTTACGTTCCTGAAATTTTCATCGGAAATTCTGAGGAGTTGAAACGCACCGTTTTGGCTTTGTGTGGTGCTGTGAAACTGTGTTTAAGGAGCAGAGGGTTGAGTATTCCTCCTTGGAGAAAAAATCGGTACATGCAGAATAAGTGGTTTGGACCGTATCGTAGAACCACGAACCCGGTTCAGGGAAACCCGGTTCCTGTTGTTTCTTCTTTCAGTGGCGCTAAATGTAGATTAGTTGGGTTTGACGACGCCGTTTCACAGACTAGGAGCAGTGGTGCCTTTGTCCGAACGAGATGA 909 0.4752 MNFARKKRVTDPLNDEAKARLIGGHLRQLSGVSSGSDHSGTGECDFSLSLSELVHGFLEEDNGNETDSAGNDFDSERVDSVTDRMNSVKDLLKSSAENANADSYMKMLRLHVSEAAVKFAFLKKQNVSLYNRNVMSFLREKGYNAAICKTRWESSGGLTAGNHEFIDVVRSESSTWQNNRYFVDLDFAGQFEIARPTSHYSEILSYVPEIFIGNSEELKRTVLALCGAVKLCLRSRGLSIPPWRKNRYMQNKWFGPYRRTTNPVQGNPVPVVSSFSGAKCRLVGFDDAVSQTRSSGAFVRTR 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00325 302 Pfam PDDEXK-like family of unknown function 51 259 IPR006502 -
Trre15g00325 302 NCBIfam uncharacterized plant-specific domain TIGR01615 132 260 IPR006502 -
Trre15g00325 302 PANTHER OS03G0796600 PROTEIN 17 266 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00325 Trre-Chr15 2228086 2228994 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00325 - - lja:Lj0g3v0213419.1 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g01070 13 8500840 8501691 Trre15g00325 15 2228086 2228994 PCT