Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00302 ATGGAGTTCATCCAGAGCCGCGTTGAGCCATGGATGAGGGAACAAGGAGCCAGACTCATGAAGGTTTCGTGGGGTCCACTTCAATGGCGTATGAAATGGCCATGGACTAACCACCGTGAACAGAAGAAACGGATCAAGGAAGAGTATCAACGCCGACGGAAACAGCTTAATGATCTCTGTCTCGCTCTTAAAACTGATTCTCTCTCCGATTTGCAGGATCTTCTTTGTTGCATGGTTCTATCTGAGTGTGTTTACAAGAGGCCTGCTAATGAGATGATTCGAGCTGTAAATAAATTTAAGTCCGATTTTGGAGGACAAATTGTTGCTTTGGAGAGAGTGCAACCTTCGTCAGATCATGTTCCTCATAGGTATTTATTGGCAGAGGCAGGGGACACTTTATTTGCTTCTTTTATAGGAACAAAGCAATACAAGGATGTAATTGCTGATGCAAATATACTTCAAGGTGCAATCTTTCACGAGGATGCTGCTGAGGAATCAGACGCACATGCAGAAACTGAATCCGATAAGGGTGAAAACCAAAGTGGAAAAGAATATGTGTGGAATCCTCTAGAATCCAGGTCTAAACAAATGAAGAGTAAATATAAACCTGCTGTCCATAGGGGTTTCATGGCCCGTGCTAAAGGAATACCTGCATTAGAATTGTACAGGCTTGCTCAAAAGAAGAAACGCAAGCTTGTTTTGTGTGGCCATTCACTTGGAGGAGCAGTAGCTGCATTAGCTACTCTTGCCATTTTGAGAGTAATTGCTGCTTCATCTTCATCAAAGGAAAACGGGAATGTCTCGGTAAAATGTATTACATTTTCTCAACCGCCTGTTGGAAATGCTGCTTTGAAGGACTACATTAATAGAAAAGGTTGGCAGCATTATTTCAAGAGTTATTGCATCCCCGAAGATTTGGTTCCCCGTATTTTATCTCCTGCATACTTTCGCCATTATAATGCTCAGTCTGTGCCAGTGCCTTCTGAAACTGAAACTAACAGCTTATTATTGAGAGAACTGGAGGAAGGGGTAACAAAGCCAAAAGCCAATGATGGAGAACAGTTGGTTTTGGGAGTAGGTCCTGTGCAGAAATCCGTCTGGAGACTCTCAAGGCTAGTCCCTATAGAAGGATTGCGAAGACAATTTAGTAAACACCAAGAAAGAAGACTAAATTCTGTTGAAACAAATTCATTGCCTGATTCTCTTGCTGATACCTTGATTGAGGAGGAAGTGGTTCAACCACGGTCACTTGAAATACAAGAGAGTTCCGATGGCATATCGCTCAAGCCTTTTCCTGAAACCGAGAAACATTCATTGGAGGTGTCAACAAGTAGGAAAACAAATGCAAAGAGCAATAACATAAATGGTGATGAAGGAAAATGGAACAGAGTACCTTATTTACCATCATATGTACCATTTGGACAGCTTTATTTATTGGAGAATTCCTCTGTAGAGTCACTATCAGGTGCAGAGTACTCGAAGTTGACATCGGTCAGATCAGTGATTGCTGAATTGAGGGAAAGATTTCAATCACATTCAATGAGATCATATCGATCTCGGTTTCAGAGAATCTTTGACTTATGTATGAACGATGATGCATCATCTTTCTTGGGGATTGAGCAATGGCACCAGGCTTCTCATCTACAGCAATGGCTTGGGCTGGCCGCTGCTGACACTGTTGAGCTTGGGCATATAGTAGAGTCTCCTACTATTCGAACTGCAACTTCTATTGTTCCCCTAGGATGGAATGGTGTGCCTGGAGCGAAAAATGGAGAACCTCTGAAAGTTGATATTACTGGTTTTGGGTTGCATCTCTGTACACTTGTTCATGCTCAAGTGAATGGTGACTGGTGTTCAACTACAGTTGAATCCTTTCCTTCTGCACCAGACTACTCTCCAAATCAAGAAATTCAGCCTGAGTTACAGAAGATGAGAATATTAGTTGGTGCTCCGCAAAGAACACCTCCAAAACATCAAACTGTGTTAGACTCTTTGATGCCTGCTTTTACGTCTGTTGATTCAAAGACTGTTGGTAGTTCAGCACCTGTTGACATGGATAAGTCTGTCCGTCCGGAAAGTTTAAATAACTTTTTAATATTTTGCACCAGTGATTTTACAACTGTTTCCAAAGAGGTTCATTTGAGAACCCGTAGAGTACGATTAGTTGGGCTAGAGGGATCCGGTAAAACTACTCTTTTAAAGGCAATCGTGAATAAATGTAAACAAAGTACTGCCACTTATGATGATGCAGTTTCAGATATTGACCTGCAAGAGGTTATTGCTGATGGTTTGTGCTATTGTGACTCTGCCGGAATAAATATGCAGAAACTGAATTCGGAAACCTCTCGCTTCAAGGATGAACTGTGGGCTGGAATTCGAGATCTAAATAGAAAGACAGATTTGATTGTTCTTGTTCATAACCTATCCCATAGTATACCTCGGTATAGTGATTCAAATGGTACTCAACAGAAGCCAGTCCTGTCACTTTTCTTGGATGAAGCTAAATGTCTTGGAATTCCCTGGGTTCTTGCAATAACAAACAAATTTGCAGTTAGTGCGCACCATCAAAAGGCAGCAATTGATGCTGCTTTGAAAGCTTACCAAGTAGCTCCTAGCTCCGTTGAAGTTATAAACTCCTGCCCATATGTTATGCCTGGTTTTGCTGGGGCTTCTTTGTCGTGGGAATCAACTAATGCAGAGCCCGATAAAAGAGTGGTTGCTCAAAAGCTTTTATTTGCTCCTATCAATTTCGTTAGAAGGCCTTTCCAGAAAAGGGAGATTGTTCTTCAAGTTGAAGGTGTCAATGCACTGTGTCAGCAAATCCATCGTGTACTTCGCAGTCATGAAGAGTCTTCTTTTCAGGAACTTGTCAGTGATAGACTGATGATGGAATTGGCCAGAGAACAAGCAATATCAATTGATGCAAGTAAAAATGGTGGAGCTAAGGCAATTTCATTGAATTCTGCTGCCGTGGGTGCATCCGTTGGGGCTGGCCTTGGCCTTGTCCTGGCAATTGTAATGGGGGCAGCATCAGGGCTGAGGAATCCCTGA 3051 0.4222 MEFIQSRVEPWMREQGARLMKVSWGPLQWRMKWPWTNHREQKKRIKEEYQRRRKQLNDLCLALKTDSLSDLQDLLCCMVLSECVYKRPANEMIRAVNKFKSDFGGQIVALERVQPSSDHVPHRYLLAEAGDTLFASFIGTKQYKDVIADANILQGAIFHEDAAEESDAHAETESDKGENQSGKEYVWNPLESRSKQMKSKYKPAVHRGFMARAKGIPALELYRLAQKKKRKLVLCGHSLGGAVAALATLAILRVIAASSSSKENGNVSVKCITFSQPPVGNAALKDYINRKGWQHYFKSYCIPEDLVPRILSPAYFRHYNAQSVPVPSETETNSLLLRELEEGVTKPKANDGEQLVLGVGPVQKSVWRLSRLVPIEGLRRQFSKHQERRLNSVETNSLPDSLADTLIEEEVVQPRSLEIQESSDGISLKPFPETEKHSLEVSTSRKTNAKSNNINGDEGKWNRVPYLPSYVPFGQLYLLENSSVESLSGAEYSKLTSVRSVIAELRERFQSHSMRSYRSRFQRIFDLCMNDDASSFLGIEQWHQASHLQQWLGLAAADTVELGHIVESPTIRTATSIVPLGWNGVPGAKNGEPLKVDITGFGLHLCTLVHAQVNGDWCSTTVESFPSAPDYSPNQEIQPELQKMRILVGAPQRTPPKHQTVLDSLMPAFTSVDSKTVGSSAPVDMDKSVRPESLNNFLIFCTSDFTTVSKEVHLRTRRVRLVGLEGSGKTTLLKAIVNKCKQSTATYDDAVSDIDLQEVIADGLCYCDSAGINMQKLNSETSRFKDELWAGIRDLNRKTDLIVLVHNLSHSIPRYSDSNGTQQKPVLSLFLDEAKCLGIPWVLAITNKFAVSAHHQKAAIDAALKAYQVAPSSVEVINSCPYVMPGFAGASLSWESTNAEPDKRVVAQKLLFAPINFVRRPFQKREIVLQVEGVNALCQQIHRVLRSHEESSFQELVSDRLMMELAREQAISIDASKNGGAKAISLNSAAVGASVGAGLGLVLAIVMGAASGLRNP 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00302 1016 MobiDBLite consensus disorder prediction 164 189 - -
Trre15g00302 1016 SUPERFAMILY alpha/beta-Hydrolases 69 319 IPR029058 -
Trre15g00302 1016 Pfam Lipase (class 3) 194 310 IPR002921 GO:0006629
Trre15g00302 1016 CDD Ras_like_GTPase 721 884 - -
Trre15g00302 1016 MobiDBLite consensus disorder prediction 164 180 - -
Trre15g00302 1016 MobiDBLite consensus disorder prediction 426 454 - -
Trre15g00302 1016 Pfam 50S ribosome-binding GTPase 719 817 IPR006073 GO:0005525
Trre15g00302 1016 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 718 846 IPR027417 -
Trre15g00302 1016 Gene3D - 718 876 IPR027417 -
Trre15g00302 1016 Gene3D alpha/beta hydrolase 71 342 IPR029058 -
Trre15g00302 1016 Coils Coil 39 66 - -
Trre15g00302 1016 PANTHER F21O3.11 PROTEIN 1 1016 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00302 Trre-Chr15 2065091 2074155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00302 1 1016 Acyl Lipid Metabolism Gene Families AT3G07400 59.903 0.0 1243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00302 - - gmx:100797051 1593.94