Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00295 ATGAATCAAACCTCCGCGTCAGGCTTTGAAAATCTAATCGGCTATTACGAACCTCAAGTTCAAGAGCTTATTGTTATTGATGAAGTGCTATCTGCTATGGTTGGGATTGAAGGACGTTACATTTCAATCAAAACACTCCGAGGAAAGAAGGATGAGATTATTAATTTCTTGGTGGACCCGTCTATGGATTCAGCACTGCAGGAGTTGGCAAAACGGGTATTCCCTCTTTGTAGGAGCTTTCTGTTGATCGACCAATTTGTGGAGTCAAGGTCCCAATTTCAGAATGGGCTAGTTAATCATGCCTTTTCTGCTGCACTTAGGGCATTCCTTCTCGATTACCAGCTCATGGTGGCACAACTTGAGCACCAATTTCGGCTCGGGAGACTTTCCCTTCAAGGATTGTGGTTCTATTGTCAGCCCACGTTGAGGTCAATGCAAGCGTTGTCTACTGTCATACAGAAGGCTTCAGTCAACAATTTTTCTGGTTCTGCCGTTCTTAACTTACTGCAGAGCCAGGCAAAGGCTATGGCAGGAGATATTGAAGTTAGGTTGTTGCTGGAGAAAATGACACAATGTGCTAGTAGGGCCTACATGAGCATATTGGAAAGATGGGTATATGAAGGAGTAATAGATGATCCTTATGGTGAATTTTTCATTGCAGAAGACAAATCGCTTCTAAAGGAGAGTCTCACTAAAGATTATGATGCAAAGTATTGGCGACAACGTTACAGCCCCAAAGATGGAATTCCTAGTTTCCTTGCAAATATTGCAGGAACAATTTTGACCACAGGAAAATATCTAAATGTCATGAGAGAATGTGGACACAATGTTCAGGTGCCTCCATCAGAAAATTCAAAACTAACGAGCTTTGGCTCAAACCATCATTATCTTGAATGTATTAAGGCTGCTTATAACTTTGCAAGTGGCGAACTTGTGAATCTCATTAAGGAAAAGTACGATCTTACAGGAAAATTGCGGTCTATAAAACACTACCTTCTCCTTGATCAGGGGGATTTCTTAGTACATTTTATGGATATTGCTCGAGATGAGCTGGCCAAAAAACCTGATGAAGTCTCAGTTGAAAAGCTGCAGTCTCTTCTAGACCTTGTTTTGCGTACAACAGCAGCTGCCGTCGACCCTTATCATGAAGGCTTAACCTGTATTGTGGAAAGGTCATCTTTGCTTAAAAGGTTGGGTACATTTAATGTTACTGAAGTTAACCAGAGAGAATCCAGTAATAATGATATTCTGGAGGAGCCTGTTAGCATCACCGGACTTGAAACATTTTCACTAAGTTATAAGGTGCACTGGCCATTGTCTATAGTATTATCACGTAAAGCCCTTACAAAGTACCAGTTAATTTTTCGATTTCTTTTCCACTGCAAACATGTTGACCGTCAGCTATGTGGAGCATGGCAAACACATCAAGGAGTTCGTGCTCTCAATACACGTGGAACTGCTATCTCCAGATCATCTCTTCTGTGCCGAAGTATGCTAAAATTTATCAACAGCCTTTTGCATTATCTAACATTTGAGGTTATTGAACCCAATTGGCATATGATGTATACCAGACTTCAGTCAGCAAATAGCATAGATGAGGTTATACAACATCATGATTTTTTCCTTGATAAATGTTTGAGAGAGTGTTTACTACTTTTACCTGAGTTGCTGAAGAAAGTGGAGAGGCTTAAATCCATGTGCCTACAATATGCAGCTGCAACACAGTGGCTTATATCATCTTCTATCGTATTTCATAGTCCCGATGAACCTAAAGTTGATTCGGTTGGAGCTAAACAATCAAAATCAGGTCAGGTACGGAAGTCAACCACCAGAAATGCGGCAGTCACTGAATCTATTCTCAAATTTGAGAAGGAATTTGATACCGAACTTCAGAGTCTTGGATCAATCTTGAGTAGTAGCTCCCAGGCAGAGCCATATTTGGCCCATCTTGCGAAATGGGTACTTGGTGTTAAACATGAACAGAATGGTTTGTGA 1995 0.409 MNQTSASGFENLIGYYEPQVQELIVIDEVLSAMVGIEGRYISIKTLRGKKDEIINFLVDPSMDSALQELAKRVFPLCRSFLLIDQFVESRSQFQNGLVNHAFSAALRAFLLDYQLMVAQLEHQFRLGRLSLQGLWFYCQPTLRSMQALSTVIQKASVNNFSGSAVLNLLQSQAKAMAGDIEVRLLLEKMTQCASRAYMSILERWVYEGVIDDPYGEFFIAEDKSLLKESLTKDYDAKYWRQRYSPKDGIPSFLANIAGTILTTGKYLNVMRECGHNVQVPPSENSKLTSFGSNHHYLECIKAAYNFASGELVNLIKEKYDLTGKLRSIKHYLLLDQGDFLVHFMDIARDELAKKPDEVSVEKLQSLLDLVLRTTAAAVDPYHEGLTCIVERSSLLKRLGTFNVTEVNQRESSNNDILEEPVSITGLETFSLSYKVHWPLSIVLSRKALTKYQLIFRFLFHCKHVDRQLCGAWQTHQGVRALNTRGTAISRSSLLCRSMLKFINSLLHYLTFEVIEPNWHMMYTRLQSANSIDEVIQHHDFFLDKCLRECLLLLPELLKKVERLKSMCLQYAAATQWLISSSIVFHSPDEPKVDSVGAKQSKSGQVRKSTTRNAAVTESILKFEKEFDTELQSLGSILSSSSQAEPYLAHLAKWVLGVKHEQNGL 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00295 664 FunFam Gamma-tubulin complex component 321 655 - -
Trre15g00295 664 Pfam Gamma tubulin complex component N-terminal 26 318 IPR041470 -
Trre15g00295 664 Gene3D - 321 654 IPR042241 -
Trre15g00295 664 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 14 646 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Trre15g00295 664 Pfam Gamma tubulin complex component C-terminal 321 650 IPR040457 GO:0043015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00295 Trre-Chr15 2013417 2021568 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00295 K16569 - gmx:100795585 1104.35