Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00287 ATGGCTTTCTCTTTACTTTACTTTCTCCTCTACTCACTGATTCTTCAATCCATCAGTGTTGTAGCTCAAAACAAAAGTACTATAGCCATTGGTGATTCTTTTACTGCACAAACAAACAACTCTACATGGTTACTTTCACCTTCTGGTCACTTTGCCTTTGGTTTTGTTCCACTTGAAGACACTGATCTTTTTTTGCTTTCCATTTGGTATGCCAAAATTTCTGATAAAACTGTTGTGTGGTATGCTAATAGAGACAGTCCTGCACCAACAGGGTCAAAAGTGGAACTGGATGCAAATGATGGCTTGGTGTTAACTTCTCCATATGGTATCCAGTTGTGGAAAACCGAAGGACTCAATGCTAAAGTTTCTCGCGGTGTGTTTAATGACACCGGCAACTTTGTGCTTAAGGGTGATAAACTCAACAGTGTTTGGGAGACTTTCCAGTTTCCTAGTGACACCTTGTTGCCTACTCAGGCTCTTCAAAAAGGTGGAAAGCTTTCTTCAAGGCTTAAGGAGACAAATTTCACTAAAGGAAGGTTTGAGCTTCTTTTACAAAATGATGGTAATCTTGTTATGCATTCTATTAATTTACCATCTGGTAATGTTAATGAAAACTACTATGAAAGTAAAACTGTTGGATCCAATACATCAAGTGCTGGAACTCAATTGGTCTTTGACAGATCAGGGTACTTGTATGTTTTGGGAGAGAACAATGAAAAATACAATGTGTCAGAAGAAGAGAGTAAAGTCTCTACCACTGATTTTTATCTTAGAGGAACTCTTAATTTTGATGGAGTGTTCACACTTTACAAGCATCCAAAGAGTTCAGCTGAGAGTGAAGGCTGGACCATAGTGTGGTCTAAACCTGATAATATATGTAATCATGTTGATAGTGAAGGGAGTGGTGTTTGTGGATATAATAGCTTCTGCACTTTGGGAGATGATAAGAGACCAATATGTCAGTGTCCGAGACGCTACTTACTTGTTGACCCCGATGATCCAAATGGTAGCTGCAAGCCAGACTTCATACAAGGATGTGCAGAAGATGAACTAAGTAAAAGGAAAGATCTCTATGACTATGTGATTTTGATTGACACTGATTGGCCTATGGCAGATTCTGTGCTTCAAAAGCCTTTTACTGAAGAAGAATGTAAGAAATCTTGTATGGAAGATTGCTTTTGTTCTGTGGCTATTTTCAGGTTAGGTGATAGTTGCTGGAAGAAGAAATTACCACTCTCAAATGGAAAAGTTGATAAAACTCTTAATGGTGCTAAGGCGTTCTTGAAAGTGAGAAAAGATAATTATACCTCCTTTGTTGTTCCTCCAAATCAAATCATTGTGAACAAGAATAATAATAGGGAAACTTTGGTTTTGGTTCTTTCTGTGCTTTTTAGTAGCTCTGCTATTCTCAATGTTGCATTCGTTGTTGCAATATGTGTCAGCGCCTCCTTCATTTTTCAGTACAAGAAGAAGCTTAGAAGTGCTAGCAAAAGTGGCAATTTTGTTGAAGTTGAGTCCAATTTGCGTTGCTTCACATACGAAGAGCTTGAAGAAGCTACCAATGGATTTTACAAAGAGCTAGGAAGGGGAGCTTTTGTGCTACTTGAGATAATTTCATGTAGAAGATGTGTTGAAGAAATGGACCAAGAAGATGAAGAGATGGCTATATTAACTGATTGGGCTTATGATTGCTACAAAGATGGTTCTGTAGATGCATTGGTTGAGGGTGACAATGAGGCATTGGCGGACAAGGAAAAGTTGGAGAAATTGGTAATGATTGCTATTTGGTGTGTTCAAGAGGATCCATCTCTTAGACCAACCATGAGAAATGTGATACATATGCTTGAAGCCTTGGGAATTCAGGGAACAGGTGTCGGGGAAGGTGATCGCGAAGGGGCCTAA 1902 0.3896 MAFSLLYFLLYSLILQSISVVAQNKSTIAIGDSFTAQTNNSTWLLSPSGHFAFGFVPLEDTDLFLLSIWYAKISDKTVVWYANRDSPAPTGSKVELDANDGLVLTSPYGIQLWKTEGLNAKVSRGVFNDTGNFVLKGDKLNSVWETFQFPSDTLLPTQALQKGGKLSSRLKETNFTKGRFELLLQNDGNLVMHSINLPSGNVNENYYESKTVGSNTSSAGTQLVFDRSGYLYVLGENNEKYNVSEEESKVSTTDFYLRGTLNFDGVFTLYKHPKSSAESEGWTIVWSKPDNICNHVDSEGSGVCGYNSFCTLGDDKRPICQCPRRYLLVDPDDPNGSCKPDFIQGCAEDELSKRKDLYDYVILIDTDWPMADSVLQKPFTEEECKKSCMEDCFCSVAIFRLGDSCWKKKLPLSNGKVDKTLNGAKAFLKVRKDNYTSFVVPPNQIIVNKNNNRETLVLVLSVLFSSSAILNVAFVVAICVSASFIFQYKKKLRSASKSGNFVEVESNLRCFTYEELEEATNGFYKELGRGAFVLLEIISCRRCVEEMDQEDEEMAILTDWAYDCYKDGSVDALVEGDNEALADKEKLEKLVMIAIWCVQEDPSLRPTMRNVIHMLEALGIQGTGVGEGDREGA 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00287 633 Pfam D-mannose binding lectin 77 161 IPR001480 -
Trre15g00287 633 Gene3D Transferase(Phosphotransferase) domain 1 531 621 - -
Trre15g00287 633 FunFam Uncharacterized protein 150 280 - -
Trre15g00287 633 Gene3D - 150 280 IPR036426 -
Trre15g00287 633 ProSiteProfiles Bulb-type lectin domain profile. 30 148 IPR001480 -
Trre15g00287 633 CDD B_lectin 38 150 IPR001480 -
Trre15g00287 633 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 210 IPR036426 -
Trre15g00287 633 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 533 618 - -
Trre15g00287 633 Gene3D - 19 149 IPR036426 -
Trre15g00287 633 SMART blect_4 36 150 IPR001480 -
Trre15g00287 633 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 22 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00287 Trre-Chr15 1988928 1993002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00287 533 615 Receptor kinase-like Gene Family AT3G53380 31.034 2.47e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00287 - - mtr:11430405 701.819