Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00266 ATGGCTTCTACAAGTTCTTCTACTTTCGTTCAGTTCCATTCTGTTTCTTCTTCTAATCCTCAGCTTTTCCTCACCAAACTCCCTAACAATAACCAAATCTTCCTTTCTTCTTCTTCTTCTTTCAAACGGGCTTCTAATTATAAGCGCGTTTATACAAAAGCTGTTTCTACAGACTCACAAAAACCTCTTACTGAGGATAAACAAAACACTCCCTCATCATTATCTTCCAAACTGGTACTTGTTCTTGGTGCTTCAGGAGGTGTTGGGCAGCTAGTTACAGCATCACTGCTTCAGCGGAATATTAAGTCACGCTTGATTCTTAGGGATATTGAGAAAGCTAAGGCACTGTTTGGTGAACAAGATGAGGAGAGATTGCAGGTATTTAAAGGAGACACAAGGAAGGAGGGTGATTTAGATCCATCCTTATTTGAGGGAGTCACTCATGTGATTTGCTGTACTGGAACAACGGCTTTTCCTTCAAAGCGGTGGGATGATGAAAATACACCAGAAAGAGTTGATTGGGTAGGAGTGAAGAATCTAATATCTTCCTTGCCTTCATCGGTGAAGAGAGTTGTTCTTGTGTCATCGATAGGTGTGACAAAGTGTAATGAATTGCCATGGAACATTATGAACCTATTTGGTGTCTTGAAGTATAAGAAGATGGGGGAGGAATTTCTTCAGAACTCTGGCTTTCCATATACGATAATTAGACCTGGACGGTTGACAGATGGACCGTACACATCTTATGATCTCAATACTTTACTCAAAGCAACAGCTGGCCAACGACGAGCAGTACTTATAGGTCAAGGAGATAAACTAGTGGGAGAGGCCAGTAGAATCGTCGTGGCTGAAGCCTGTATACAGGCACTAGATTTAGAAGTCACTGAAAATCAAATATACGAAGTTAGCTCTGTCGAGGGTGAAGGTCCTGGAAATGATACTCAGAAGTGGCGAGAATTATTTGAGGCCGCGTGCTCAAGCTAA 984 0.4177 MASTSSSTFVQFHSVSSSNPQLFLTKLPNNNQIFLSSSSSFKRASNYKRVYTKAVSTDSQKPLTEDKQNTPSSLSSKLVLVLGASGGVGQLVTASLLQRNIKSRLILRDIEKAKALFGEQDEERLQVFKGDTRKEGDLDPSLFEGVTHVICCTGTTAFPSKRWDDENTPERVDWVGVKNLISSLPSSVKRVVLVSSIGVTKCNELPWNIMNLFGVLKYKKMGEEFLQNSGFPYTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVLIGQGDKLVGEASRIVVAEACIQALDLEVTENQIYEVSSVEGEGPGNDTQKWRELFEAACSS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00266 327 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 71 304 IPR036291 -
Trre15g00266 327 Pfam NAD(P)H-binding 83 291 IPR016040 -
Trre15g00266 327 CDD SDR_a5 79 304 - -
Trre15g00266 327 PANTHER FLAVIN REDUCTASE-RELATED 55 323 - -
Trre15g00266 327 Gene3D - 75 326 - -
Trre15g00266 327 FunFam NAD(P)-binding Rossmann-fold superfamily protein 75 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00266 Trre-Chr15 1826270 1829567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00266 81 197 Miscellaneous Gene Families AT4G27250 34.884 1.61e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00266 - - gmx:100804322 454.136