Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00263 ATGTTGACCCCGGCAGCAAAGAAGTTGCCACCGAAGATGGAGGGTTTCGCTCAAAATGCAGCGAGACAAGAGAAACCAAAAGACGCGACAGTGCCAATGACAGAGGCAGTTATGAATGGGTTCAAGCCAGATACAGTGCCAATTTACAAGGAGTTAGTTAAAGAGTTTGCGGTTTGTGATCGTTGGTTCGCTTCGGTTCCTGCGTCAACCCAACCGAACCGGCTCTATGTGCATTCCGCCACGTCACATGGGTTAAGTAGCAATGACACAAATAAGCTCATTGGTGGGCTACCTCAAAAGACCATATTTGATTCTTTGGATGAAAATGGATTCAATTTTGGGATCTATTATCAACAACCACCATCCACTCTTTTCTACAGGAGTCTTAGGAAGCTAAAATACATAGATAACTTTCATGAATATGGCTTAACATTCAAGAAGCATTGTGACGAAGGAAAATTACCAAACTACGTGGTGATAGAACAAAGATTTTTCGACTTGTTATCAATACCTGGAAATGACGATCATCCATCTCACGATGTTGGAGAAGGACAAAAATTCGTAAAAGAAGTGTATGAAGCACTAAGAGACGGAGTTCCTAGTCCAGATGACATTGTTGGTCCTGAGCCTTTCAAGTTTAAATTTGATAGGCTTGGTGTAAGGGTTCCAACCATCTTTATTTCTCCATGGATTGAGCCAGGAAAAGTGTTGCATGAACCTTCTGGACCATTCCCAACATCACAATATGAACATTCATCTATACCAGCAACTGTTAAGAAGATATTCAATCTCCCTAATTTTTTGACAAAGAGAGATGCATGGGCTGGAACATTTGAGGGTCTTTTAATTCTAACAAAACCAAGAACTGATTGTCCAGAGAAATTGCCCGAACCGATTAAACTAAGAGAGGCTGCAGCTAAAGAACAAGCCAAGTTGAGTGAATTTCAGGAAGAATTGGTACTAATGGCAGCTACTCTAAATGGTGATCATAGAAAGAGTATATATCCTGACAAGTTAATCGAGAACATGTGTGTTACGGACGCAGTTAAATATGTCGAAGATGCATTCAATACATTCTTGAATGAGTGTGAGAAAGCAAGACAAAATGGTGCTGATGGATCTGAAATTGTTGATTGTGCTGATACATGTAGTACACAACCAAATTCCAAAAGTTTCTTTCACAAGATGCTATCTTGTATAACCTGTGATCCATGA 1215 0.4016 MLTPAAKKLPPKMEGFAQNAARQEKPKDATVPMTEAVMNGFKPDTVPIYKELVKEFAVCDRWFASVPASTQPNRLYVHSATSHGLSSNDTNKLIGGLPQKTIFDSLDENGFNFGIYYQQPPSTLFYRSLRKLKYIDNFHEYGLTFKKHCDEGKLPNYVVIEQRFFDLLSIPGNDDHPSHDVGEGQKFVKEVYEALRDGVPSPDDIVGPEPFKFKFDRLGVRVPTIFISPWIEPGKVLHEPSGPFPTSQYEHSSIPATVKKIFNLPNFLTKRDAWAGTFEGLLILTKPRTDCPEKLPEPIKLREAAAKEQAKLSEFQEELVLMAATLNGDHRKSIYPDKLIENMCVTDAVKYVEDAFNTFLNECEKARQNGADGSEIVDCADTCSTQPNSKSFFHKMLSCITCDP 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00263 404 Pfam Phosphoesterase family 198 265 IPR007312 GO:0016788
Trre15g00263 404 Pfam Phosphoesterase family 12 197 IPR007312 GO:0016788
Trre15g00263 404 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 10 197 IPR007312 GO:0016788
Trre15g00263 404 MobiDBLite consensus disorder prediction 1 28 - -
Trre15g00263 404 Gene3D Alkaline Phosphatase, subunit A 153 311 IPR017850 -
Trre15g00263 404 Gene3D Alkaline Phosphatase, subunit A 4 101 IPR017850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00263 Trre-Chr15 1800143 1802002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00263 11 400 Acyl Lipid Metabolism Gene Families AT3G03530 59.862 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00263 K01114 - gmx:100805391 683.33