Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00259 ATGACAGGAGGGAAAGAAGAAAAGAAAGATGAGAAGGGAAAAGCTAAAATTGAAGAAAAGATAGAAAAGAAGAAAGATGAAATTGAATTGATTACTGCTATTTACAAATTAAACTTGCATTGTCAAGAATGTGGGAACAAGATTAAGAAGCATCTCTTAACTACTCAAGGAGTACAGACTGTGGAGATGCATATTGAGAAAGGAGAAATAAAGGCAAAAGGGAAATTGGACCCTTTGAAAATCTTGAAGATTATAGAGAAGAAGAGCAATAGAAAAGTTGAATTAATATCACCAAAAGTGAAACCCAAGGAGATTACTATTACTGATAAAAAGCCAAAGGAAACTAAGGATCCAATTGTTCGAACTATCACGGTGAAGGTTCACATGCATTGTGACAAATGTGAGGCTGACCTAAAACGAAGACTAATCAAGCACAAAGGTATTTTTAATGTTAAAACCGACAAGAAAGCTCAAAGTCTAATAGTTGAAGGGACTATAGAAGTGGAGAAGTTGACATCATTTTTGAGAAAAAGAGTGAATACAAATGCTGAGGTTATTTCTATAAAAGAAGAGAAAAAAGAAGAAAAGAAAGAAAAGGGCAAAGAAGAAAAAAAGGAAGAAAAGAAAGACAAAGGCAAAGAAGAAGAAAAGGGCAAAGAAGTAAAATCTTCAGAATCAACTAAAGTAATAGAAATTCATCATCATGGGAATACACATGATGAGATTAAAATAAAGGACAATAATAATGTTCCTTATATTATTCATTATGTTTATGCACCACAAATTTTCAGTGATGAGAATCCTAATTCATGTTCTATTTCATAG 825 0.3212 MTGGKEEKKDEKGKAKIEEKIEKKKDEIELITAIYKLNLHCQECGNKIKKHLLTTQGVQTVEMHIEKGEIKAKGKLDPLKILKIIEKKSNRKVELISPKVKPKEITITDKKPKETKDPIVRTITVKVHMHCDKCEADLKRRLIKHKGIFNVKTDKKAQSLIVEGTIEVEKLTSFLRKRVNTNAEVISIKEEKKEEKKEKGKEEKKEEKKDKGKEEEKGKEVKSSESTKVIEIHHHGNTHDEIKIKDNNNVPYIIHYVYAPQIFSDENPNSCSIS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00259 274 ProSiteProfiles Heavy-metal-associated domain profile. 120 187 IPR006121 GO:0046872
Trre15g00259 274 Pfam Heavy-metal-associated domain 38 88 IPR006121 GO:0046872
Trre15g00259 274 Pfam Heavy-metal-associated domain 124 172 IPR006121 GO:0046872
Trre15g00259 274 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 14 273 IPR044577 GO:0046872
Trre15g00259 274 Coils Coil 178 217 - -
Trre15g00259 274 CDD HMA 124 169 IPR006121 GO:0046872
Trre15g00259 274 Gene3D - 27 93 - -
Trre15g00259 274 SUPERFAMILY HMA, heavy metal-associated domain 33 88 IPR036163 GO:0046872
Trre15g00259 274 SUPERFAMILY HMA, heavy metal-associated domain 119 177 IPR036163 GO:0046872
Trre15g00259 274 ProSiteProfiles Heavy-metal-associated domain profile. 30 93 IPR006121 GO:0046872
Trre15g00259 274 MobiDBLite consensus disorder prediction 191 242 - -
Trre15g00259 274 Coils Coil 14 34 - -
Trre15g00259 274 Gene3D - 119 194 - -
Trre15g00259 274 CDD HMA 39 87 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00259 Trre-Chr15 1780215 1782083 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00259 - - gmx:100783418 327.405