Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00230 ATGGAAGACAAGGATTCAGTTGCTAAAATGATGGACTCTACATCTTCGAAGATACAACAGCTGCAAAAGGCTTTTGCTGAACTTGAAAGTTACCGAGCTGTTACTCTTAACATGAAATGGAAAGATCTAGAGGAACATTTTCAGGGGCTAGAGAAATCCTTGAAGAAGCGCTTTCGTGAACTGGAAGACCAAGAAAAATTGTTTGAAATCAAAACAAGGAAATCTCGTGAAATGTTGGAGAAACAGGAAGCAGTTGTTTTTGCTAAGGAGCAAGCCTCGCTGCAGAGGCTTCAAAAGAAGAGAGATGCTTCTGTTTTCAGCATTGTAAATGCTCGAAAAAAGCACAGGAAGGTTTCATCAAAGGGTTTCGTCTTTAATGAGAGTCCAGGGACACCAGTTGTAGAGGAGAAACCTTTGGATGCTGCGTCCACTGGGGCTGAAGGCAACTTAGCAAATGAGCAACTTTCTCCTGAAAATGTAAATGTGGACTTGATGTCTTATCCAGAGTTGGTAAAGCTATGCAAAGAGACAGATACTGCTGGACTTCACAAATTTATATCTGACAACCGCAAGAACCTTGCTGCTGTAAGGGAGGAAATACCACTTGCATTAAGAGCTGCACCCAATGCTGCCCGACTAGTTTTAGATTCGTTGGAAGGATTTTATTGTACGGAAGTGTCAAGTCATGATATAAAGAAAGATGCTAACTTGTTGGGTCTTCGTCGAACCAGTATCATGTTGCTGGAATGTCTAAGTGACTTCCTGACTAATTTGGGTTCTGTTTCTAATGTGATTTCTGAAGATATCAAGGATAGGGCAAAAGCAGTTGCTGAAGAGTGGAAACCAAGATTGGATGCTCTTGATGTTGATGCTAGCAATGGGAATTCCTTGGAGGCTCATGCATTTTTGCAACTTCTAGCCAGTTTTGGTATTGCCTCAGATTTTAATGAGGAGGAGTTATCCAGGCTAATTCCGATGGTGTCTAGGCGTCGCCAAACTGCTGATTTATGCCGGTGCCTTGGGTTATCGGACAAGATGCCTGGTGTGATTGAAGTATTGGTAAACAATGGCCGGCAAATTGATGCTGTTAACTTGGCTTTTGCATTTGATCTTACAGAACAGTTTTCACCTATTCCTTTGCTGAAGTCTTACCTGAATGATGCTAAGAAAACTTCTTCTCCAGTCAAAAGTGTCAACTCTTCTCCCACTGCACAGACTGAGGTTAATGAAAGAGAGCTATTTGCCCTCAAGGCCATACTGAAGTGCATTGAAGAACATAAACTTGACGAGCAGTACCCTATGAATCCTCTTCAGAAACGAGTGGTCCAACTTGAGAAGGCCAAAACTGACAAGAAGAGGGAAACTGAAGCAACCAAACCTCAACCCAAGAGACCCCGTGCTAATGGCATGGGATATGGTCCTCGTGTCACTAACAATCCTTCTGACAGAACTTCATATGTTAGAGTTGTTGACAGGTACCCGCCATATATGTATGACCGACCTTACTTGTACCCCGGACCAACTGAAAATCACTGCACCCCATTCCTGGGTTCTGCAAACTACAACGTCTCTCCTAATCCCGGAACTTACTTTGGAAATGGCTACCAATATCAAGCTACATATCTTCACTAA 1632 0.4271 MEDKDSVAKMMDSTSSKIQQLQKAFAELESYRAVTLNMKWKDLEEHFQGLEKSLKKRFRELEDQEKLFEIKTRKSREMLEKQEAVVFAKEQASLQRLQKKRDASVFSIVNARKKHRKVSSKGFVFNESPGTPVVEEKPLDAASTGAEGNLANEQLSPENVNVDLMSYPELVKLCKETDTAGLHKFISDNRKNLAAVREEIPLALRAAPNAARLVLDSLEGFYCTEVSSHDIKKDANLLGLRRTSIMLLECLSDFLTNLGSVSNVISEDIKDRAKAVAEEWKPRLDALDVDASNGNSLEAHAFLQLLASFGIASDFNEEELSRLIPMVSRRRQTADLCRCLGLSDKMPGVIEVLVNNGRQIDAVNLAFAFDLTEQFSPIPLLKSYLNDAKKTSSPVKSVNSSPTAQTEVNERELFALKAILKCIEEHKLDEQYPMNPLQKRVVQLEKAKTDKKRETEATKPQPKRPRANGMGYGPRVTNNPSDRTSYVRVVDRYPPYMYDRPYLYPGPTENHCTPFLGSANYNVSPNPGTYFGNGYQYQATYLH 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00230 543 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 14 468 - -
Trre15g00230 543 MobiDBLite consensus disorder prediction 445 482 - -
Trre15g00230 543 MobiDBLite consensus disorder prediction 445 461 - -
Trre15g00230 543 Pfam Frigida-like protein 166 455 IPR012474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00230 Trre-Chr15 1566129 1569401 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00230 - - gmx:100806993 856.284