Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00229 ATGGAAGAAAAAGATTCGGTGGCTACGCTGATGGATTCGACAACTTCTAAGATACAACAACTGCAGAAGGCATTTGCTGAACTTGAAAGTTATCGAGCTGTTACTCTTAACATGAAATGGAAAGAACTGGAGGAACATTTTCACGGGCTCGAGAAATCCTTGAAGAGGCGTTTTCATGAGTTAGAAGATCAAGAAAAAGTGTTTGAAAACAAGACAATGAAAGCTCGTGAAATGTTGAAGCAAGAAGCAGCTATTTTTGCCAAGGAGCAAGCTACATTGCAGAGGCTTCAAGAGAAAAGAGATGCTGCTACATTTGCCATTATAAATGCTCGAGAAAAGCACAGGAAGGTTTCACAAAAAGATTTAGCCATTGTCTGTAATGGGGGTCAAGGTACATCATATGTGGAGGAGAAACCAATGGATGCTGTTTCTAATGTGACGGAAGGTCATGTAGAAGATGTGAAACTTTCTTTTGAAAATGGAAATTTGGAATTGGTCTCTTATCCAGAATTGCTTAAACTTTGTAAGGAGATGGATGCTGCTGGACTGCACAAATTCATATCTGACAATCGTAAGAACCTTGCGGCTATAAGGGAGGAAATACCACATGCACTGAGAGCTTCTCCTAATGCTGCCTGTTTAGTCTTAGATTCCTTGGAAGGATTTTACTGCATGGAAGTGTCAAGTCAGGATATTAAGAAGGATGCTAACTTATTAGGTCTCCGCCGGACCTGTATCATGCTGATGGAATGTCTGAGTGATTTCCTGACCAATTCCGACCGTGGTTCTAATTTAGTTTTGAAATATATCAAGGAAAGGGCAAAGACAGTTGCTGAAGAATGGAAACCTAAATTGGATGCTCTTGACATGGATGCTAGTAATGGGAATTCCTTGGAGGCTCATGCATTTTTGCAACTTCTAGCTAGTTTTGATATAGCGTCTGGTTTTGACGAGGAGGAGTTATCCAGGCTAATTCCAATGGTGTCTCGGCGTCGCCAAACTGCTGATTTATGCCGTAGCCTTGGATTGTCAGAGAAGATGCCTGGTGTAATTGAGGTTTTGGTGAACAGTGGGAGGCAAATTGACGCAGTTAACCTGGCTTTTGCATTTGATCTGACGAAACAGTTTTCTCCTGTTACCTTGCTGAAGTCTTATTTGAAGGATGCTAGAAATTCTTGCTCACCTGGCAAAAGTGGTAACTCATCCCCCACTGCACAGATTGAAGTTAATGAACGAGAGCTAATCGCTCATAAAGCAGTTATCAAGTGCATTGAGGAACATAAACTTGATGAACAGTATCCTCTAGATCCTCTCCTGAAACGAGTTGTCCAACTTGAGAAGGCCAAAGCTGACAAAAAGAGGGAAGCCGAAGCGACAAAGCCTCAACCGAAGAGACCTCGTGCTAATAATGTGGGATACGGTCCTCGTGTCACTAACATTCCTTCTGACAAAACTTCCTATGCTAGAGTTGCTGACAGGTACCCTCAAACGCAATATGTGTACGACCGACCATACATGTACCCTGCACCAACCGAAAATCACTGTCCCCCTCTCCTCGGCAATGCACATTATAACTTCTCTCATAATCATGGCAACTACTTTGGAAATGGTTATCAGTACCAAGCTACATATCTTCACTAG 1641 0.4229 MEEKDSVATLMDSTTSKIQQLQKAFAELESYRAVTLNMKWKELEEHFHGLEKSLKRRFHELEDQEKVFENKTMKAREMLKQEAAIFAKEQATLQRLQEKRDAATFAIINAREKHRKVSQKDLAIVCNGGQGTSYVEEKPMDAVSNVTEGHVEDVKLSFENGNLELVSYPELLKLCKEMDAAGLHKFISDNRKNLAAIREEIPHALRASPNAACLVLDSLEGFYCMEVSSQDIKKDANLLGLRRTCIMLMECLSDFLTNSDRGSNLVLKYIKERAKTVAEEWKPKLDALDMDASNGNSLEAHAFLQLLASFDIASGFDEEELSRLIPMVSRRRQTADLCRSLGLSEKMPGVIEVLVNSGRQIDAVNLAFAFDLTKQFSPVTLLKSYLKDARNSCSPGKSGNSSPTAQIEVNERELIAHKAVIKCIEEHKLDEQYPLDPLLKRVVQLEKAKADKKREAEATKPQPKRPRANNVGYGPRVTNIPSDKTSYARVADRYPQTQYVYDRPYMYPAPTENHCPPLLGNAHYNFSHNHGNYFGNGYQYQATYLH 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00229 546 MobiDBLite consensus disorder prediction 450 482 - -
Trre15g00229 546 Coils Coil 79 113 - -
Trre15g00229 546 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 14 470 - -
Trre15g00229 546 Coils Coil 51 71 - -
Trre15g00229 546 Pfam Frigida-like protein 167 456 IPR012474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00229 Trre-Chr15 1560656 1562540 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00229 - - aprc:113851605 894.419