Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00213 ATGGCACAACAAGTGAGGAACAAGCAAGTGATTCTGAGGGACTATGTGTCTGGTTTTCCTAAAGAATCAGACATGATCATTGTTGACAGTACCATAACTCTCAAGCTTCCAGAAGGTTCCAATGATGTTCTGCTAAAAAATCTATACTTGTCTTGTGATCCATACATGAGGAATCTCATGAACAAACCACAAGGAATTCCTAATCCTCTTTCATATACCCCTCAATCTGTAATAGCAGGTTTTGGGGTGTCTAAAGTCCTTGAATCAGGACACCCTGATTACAAGGAAGGTGATTTAGTTTGGGGATTCTGTAAATGGGAAGAGTACAGCTTGGTCCCTTCATCTCAAATACTTTTCAAAGTTGAGCACACTGATGTCCCACTTTCCTACTATACCGGAATTCTCGGTATGCCAGGAATAACTGCTTATGGTGGTTTCTTTGAATTAGGCAGTCCTAAGAAAGGAGAGAATGTTTTTGTTTCAGCTGCATCTGGTGCAGTTGGTCAACTTGTCGGACAATTCGCTAAACTGACAGGATGTTATGTTGTTGGAAGTGCCGGTAGCAAAGATAAGGTAGATCTATTGAAGAATAAATTTGGATTTGATGAAGGTTTCAACTACAAGGAAGAGCCTGACCTCAATGCAGCTTTGAAAAGGTACTTTCCTGAAGGAATTGATATCTACTTTGAGAATGTTGGAGGCAAGACACTCGATGCTGTACTATTGAACATGAGAGTTCATGGCCGCATACCTGCATGTGGAATGATCTCACAGTACAATCTTACGCAACCTGAAGGTGTAACGAATTTGGCACATCTTGTATATAAGCGAATTCGAATGGAAGGGTTTAACAGTGCTGACTTTTTTCCTATATATCCCAAATTCTTAGAGTTTGTCCTCCCTCATATCAGAGAGGGGAAGATTGTGTATGTGGAAGACATAGCTGAGGGTCTTGAGAATGGTCCTGCAGCTTTAGTTGGCCTTTTTAGCGGTCGCAATGTTGGTAAACAAGTGCTTGTTATTGCTCGTGAATAG 1035 0.4106 MAQQVRNKQVILRDYVSGFPKESDMIIVDSTITLKLPEGSNDVLLKNLYLSCDPYMRNLMNKPQGIPNPLSYTPQSVIAGFGVSKVLESGHPDYKEGDLVWGFCKWEEYSLVPSSQILFKVEHTDVPLSYYTGILGMPGITAYGGFFELGSPKKGENVFVSAASGAVGQLVGQFAKLTGCYVVGSAGSKDKVDLLKNKFGFDEGFNYKEEPDLNAALKRYFPEGIDIYFENVGGKTLDAVLLNMRVHGRIPACGMISQYNLTQPEGVTNLAHLVYKRIRMEGFNSADFFPIYPKFLEFVLPHIREGKIVYVEDIAEGLENGPAALVGLFSGRNVGKQVLVIARE 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00213 344 Gene3D - 134 310 - -
Trre15g00213 344 Pfam N-terminal domain of oxidoreductase 8 116 IPR041694 -
Trre15g00213 344 FunFam Prostaglandin reductase 2 134 310 - -
Trre15g00213 344 SUPERFAMILY GroES-like 4 171 IPR011032 -
Trre15g00213 344 Gene3D - 9 339 - -
Trre15g00213 344 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 131 307 IPR036291 -
Trre15g00213 344 Pfam Zinc-binding dehydrogenase 166 298 IPR013149 -
Trre15g00213 344 PANTHER PROSTAGLANDIN REDUCTASE 5 341 IPR045010 GO:0016628
Trre15g00213 344 CDD double_bond_reductase_like 5 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00213 Trre-Chr15 1461335 1463216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00213 K19825 - gmx:100809668 597.816