Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00210 ATGTCGCAGCCGCAACAGCAGCAGCAGCAGCAGCAACAACAGCTAAACAGTAATATTCCAGTAAGCGAGATTTTCTGGACTCTCGTCGACAAAGCTGACAAAAAATTCTCCAAAATCAGAGACATACCTTATTACCAACGCTCCAGACACGATACATATTTCTCCAAGGTTTTCAAAGTCTACACACAATTATGGAAATTCCAACAAGAAAATCGTCAAAAACTAATCGAAGCAGGGTTAAAACGATGGGAAATTGGAGAAATTGCTTCGCGAATCGGTCAACTTTATTTCGGACAATACATGAGAACTTCTGATTTTAATTACTTATCAGAATCTTATATTTTTTATGAAGCAATTTTCACTCGTGATTATTTCAAAGATGGTTTGTTTCAAGATGTTAATATTGCAAATAAGCAATTGAGATTTTTAGCGAGGTTTTTGACGGTTTGTTTGCTTTTGAATCGGAGGGAAGTGTTGCAGCAATTGGTTAATCAGCTTAAGGTTTTGGTTGATGAGTGTAAGAGAGTGTTTGTGGATAGTGATTTTAGAGAATGGAAGGTTGTTGTTTTGGAAATTGGGAGGTTTTTGAAAGCTGATACTAGTTTTATGAATGTTAGACCGGTGAGGTATAGTTTGGTTTTGGATTCTCATCCTGATACTTTGCCACATGTTCCTGTTGCTATTGCGAAGCGGAATTTTAAATTGCGAGATGCTGTGTTGAGTAGCTTCCATTATAATGAGGTTAAGTTTTCAGAGCTTACTATTGACACTTTTAGGATGCTTCAATGTTTGGAGTGGGAACCTAGTGGCTCATTTTACCAGTCTGGTGGTTCAAAACTTAGTCAGAATGGGGCAACTGGGAGTGGTCGTATCAGTTACTTACAAGATATTGCAGATCCTACGTTACCGGCAAACCCACGGAAAGCTATCTTATACCGTCCTTCACTGACACATTTTGTAGCTGTTCTTGCCACAATTTGTGAGGAGCTTCCTCCGGATGGTATTCTCCTTGTATATTTATCAGCTTCAGGAGCAGGATCAGGATCTTGTGGTGCTGGGCATAATGAATCTGGTTGTTTAAACTTTGGTTCCCGTGGAGATAGAGGATCAAACTGCATATATCCATCTGACTTTCTACCATTTACTAGAAGACCACTTCTTTTAGTTATTGATAATGAAAACAGCAAAGCTTTTAAGGTCATAACAGAGGCAGAAAAAGGAGAGTCGGTGGCAATGCTCCTTTCTCCAAATCGGTTGCCTCCTATTGTGTCTGATTGCTCACATTCTTCAAATGGGAGCCTATTCACCATGTTTCTTACAGCTCCATTGCAAGCTTTCTGTCTGCTGCTAGGGTTTTCAGGCACTGATATTGATTTGGACTTGTACAATAAAGCTGAAATGCTGCTCTCGTCATCATTAAATAACTGGGGATTGGCGTTGGCATCATCAGACACACTTGATCCAGTTTGGGGACAGGTTTTAGGTGATCCCTTCATAAGGAGACTTCTTTTGAGATTCATATTTTCCCACACAGTGCTGACCCTGTATGCACCAGTTTACAATAAAAGTGAATTCCTTCCGACCTGTGTCCCTTCTTTTCCAACCACTGTCCCACCCTCAAACTACTCATATCAAAGTGTCATTCGGCAACTAGCCAGCATTTTTGGTGCAACTAAGCACTTCGTCTTTTCTGAGGATGCTTCTCCTGAAAATACACCTTCAAACATGGATCAATTGTGA 1740 0.4017 MSQPQQQQQQQQQQLNSNIPVSEIFWTLVDKADKKFSKIRDIPYYQRSRHDTYFSKVFKVYTQLWKFQQENRQKLIEAGLKRWEIGEIASRIGQLYFGQYMRTSDFNYLSESYIFYEAIFTRDYFKDGLFQDVNIANKQLRFLARFLTVCLLLNRREVLQQLVNQLKVLVDECKRVFVDSDFREWKVVVLEIGRFLKADTSFMNVRPVRYSLVLDSHPDTLPHVPVAIAKRNFKLRDAVLSSFHYNEVKFSELTIDTFRMLQCLEWEPSGSFYQSGGSKLSQNGATGSGRISYLQDIADPTLPANPRKAILYRPSLTHFVAVLATICEELPPDGILLVYLSASGAGSGSCGAGHNESGCLNFGSRGDRGSNCIYPSDFLPFTRRPLLLVIDNENSKAFKVITEAEKGESVAMLLSPNRLPPIVSDCSHSSNGSLFTMFLTAPLQAFCLLLGFSGTDIDLDLYNKAEMLLSSSLNNWGLALASSDTLDPVWGQVLGDPFIRRLLLRFIFSHTVLTLYAPVYNKSEFLPTCVPSFPTTVPPSNYSYQSVIRQLASIFGATKHFVFSEDASPENTPSNMDQL 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00210 579 Pfam Protein SCAI 28 346 IPR022709 GO:0003714|GO:0006351
Trre15g00210 579 Pfam Protein SCAI 357 517 IPR022709 GO:0003714|GO:0006351
Trre15g00210 579 PANTHER PROTEIN SCAI 8 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00210 Trre-Chr15 1447628 1452168 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00210 - - gmx:100810202 942.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00210 15 1447628 1452168 Trre15g00210 15 1447628 1452168 ECH