Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00202 ATGGGACAAATCTTAAACAAGCTTCAAGGTGAAGATTGGAGGAAAAAGCAAGTTAGGAATATAACAGATCGAGTTTTTCAGAAAGTAAGGAATCAAATTCAAACGGAATATTTGAGTTTTGAAGATCTGTATATTGCTGTTTTACTTGTTTACAATGATATCAACAAGATCATTCCTGGTCCCCATTTCGATCCTCCGTCAAAAGAAACAGTCAGACAAATCATGCAGGAATGTGATATGAACTTGGATGGAGCAATTGATCATGAAGAATTTGGCGATTTCATCCAGAAAATGACGGCTGATACATTCACTGTTGTTAGTCAAAAACTTATCATCACTTTGGTTGTAGCACCGTCTGTTGCAATGGCGACAAAAAGAGCGACTGAAGGTGTCCCTGGTGTTGGAAAAGTGGTGCAAAAGCTACCTAATGCAATTTATGCATCCCTTGTGACACTTGCAGTTGTGTGGTTCCAAAAGATTCAAGATGAATCTACAATCTGA 501 0.3812 MGQILNKLQGEDWRKKQVRNITDRVFQKVRNQIQTEYLSFEDLYIAVLLVYNDINKIIPGPHFDPPSKETVRQIMQECDMNLDGAIDHEEFGDFIQKMTADTFTVVSQKLIITLVVAPSVAMATKRATEGVPGVGKVVQKLPNAIYASLVTLAVVWFQKIQDESTI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00202 166 SUPERFAMILY EF-hand 24 98 IPR011992 -
Trre15g00202 166 PANTHER CALCIUM ION-BINDING PROTEIN 1 162 - -
Trre15g00202 166 ProSiteProfiles EF-hand calcium-binding domain profile. 66 101 IPR002048 GO:0005509
Trre15g00202 166 Gene3D - 11 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00202 Trre-Chr15 1401320 1403328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00202 1 156 EF-hand Containing Proteins AT1G64850 68.590 4.72e-79 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00202 - - gmx:100526914 255.373