Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00199 ATGGTTCAAGTGAGGAACAAGCAAGTGATTCTGAAGGACTATGTGTCTGGTTTTCCTAAAGAATCAGACATGAACATTGTTGATAGTACCATTACTCTTAAGCTTCCACAAGGTTCCAATGAGTTGCTGCTAAAAAATCTCTACTTGTCTTGTGATCCATACATGCGGATTCTGATGACAAAGGACACTACTGCAGAACTTGGTGCTCACACCCCTGGTTCTCCATTGATAGGATATGGTGTGTCTAAAGTCTTGGAATCTGAACACCAAGATTATAAGAAAGATGATTTAGTTTGGGGCATTACCAAATGGGAAGAGTATAGCTTGATCCCTGCAACTGGAATGTTCAAAATTGAGCACACGGATGTTCCACTTTCCTACTATACCGGAATTCTCGCTTATGCTGGTTTTTTTGAGTTAGGCTGTCCCAAGAAAGGAGAGAATGTTTTTGTTTCAGCTGCATCTGGTGCAGTTGGTCAACTTGTTGGTCAATTCGCTAAATTGACCGGTTGCTATGTTGTTGGAAGTGCTGGAACTAATGAGAAAGTGGATCTTTTGAAGAATAAATTTGGATATGATGAAGCATTTAACTACAAAGAAGAGCCTGACCTCAATGCAGCATTGAAAAGGTATTTTCCAGAAGGCATTGACATATACTTTGAGAATGTTGGAAGCAAGACACTTGATGCTGTGCTGTTGAATATGAGAGTCCATGGTCGCATACCTGTATGTGGAATGATCTCACAGTATAATCTTACTGAACCTGAAGGTGTAACAAATTTAGCACATATCATATATAAGCGGATTTGTATGCAAGGTTTTGTTGTATTTGATTACTATCACCTTTATACAAAATTCTTGGAGTTTGTCTTGCCTCTTATAAGAGAAGGAAAGGTTGTGTATGTGGAAGACATAGCTGAGGGTCTTGAAAATGGTCCTGCTGCATTGATTGGCTTGTATAATGGTCGCAATGTTGGTAAACAAGTGGTTGTTGTTGCTCATGAGTGA 1008 0.3938 MVQVRNKQVILKDYVSGFPKESDMNIVDSTITLKLPQGSNELLLKNLYLSCDPYMRILMTKDTTAELGAHTPGSPLIGYGVSKVLESEHQDYKKDDLVWGITKWEEYSLIPATGMFKIEHTDVPLSYYTGILAYAGFFELGCPKKGENVFVSAASGAVGQLVGQFAKLTGCYVVGSAGTNEKVDLLKNKFGYDEAFNYKEEPDLNAALKRYFPEGIDIYFENVGSKTLDAVLLNMRVHGRIPVCGMISQYNLTEPEGVTNLAHIIYKRICMQGFVVFDYYHLYTKFLEFVLPLIREGKVVYVEDIAEGLENGPAALIGLYNGRNVGKQVVVVAHE 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00199 335 PANTHER PROSTAGLANDIN REDUCTASE 4 332 IPR045010 GO:0016628
Trre15g00199 335 SUPERFAMILY GroES-like 278 330 IPR011032 -
Trre15g00199 335 Pfam N-terminal domain of oxidoreductase 7 118 IPR041694 -
Trre15g00199 335 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 128 295 IPR036291 -
Trre15g00199 335 FunFam Prostaglandin reductase 2 125 301 - -
Trre15g00199 335 Gene3D - 131 301 - -
Trre15g00199 335 SUPERFAMILY GroES-like 3 162 IPR011032 -
Trre15g00199 335 Pfam Zinc-binding dehydrogenase 157 290 IPR013149 -
Trre15g00199 335 CDD double_bond_reductase_like 4 332 - -
Trre15g00199 335 Gene3D - 8 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00199 Trre-Chr15 1386701 1388845 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00199 K19825 - gmx:100812337 554.288