Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00198 ATGATGCACTTGGCTTTTCAGCATTGTTGTCTCTTGTTTGCGTTGATGTACTTGAGACAAATGGGAACATACCAACCTCTAATTTGTTTTTCTCATGTTATCCTTGCTGTCCTAATTAAACAAGGTGTGGCCAGCAATAGTATAGTACCATTCCTTTATTTAATGAATGAACAAATTCAACACCACACAAACAAATCTGAACACATTTGTGACACAATTTCTGAGATGGTTCAAGTGAGGAACAAGCAAGTGATTCTGAAGGACTATGTGTCTGGTTTTCCTAAAGAATCAGACATGAACATTGTTGATAGTACCATTACTCTTAAGCTTCCACAAGGTTCCAATGAGTTGCTGCTAAAAAATCTCTACTTGTCTTGTGATCCATACATGCGGATTCTGATGACAAAGGACACTACTGCAGAACTTGGTGCTCACACCCCTGGTTCTCCATTGATAGGATATGGTGTGTCTAAAGTCTTGGAATCTGAACACCAAGATTATAAGAAAGATGATTTAGTTTGGGGCATTACCAAATGGGAAGAGTATAGCTTGATCCCTGCAACTGGAATGTTCAAAATTGAGCACACGGATGTTCCACTTTCCTACTATACCGGAATTCTCGCTTATGCTGGTTTTTTTGAGTTAGGCTGTCCCAAGAAAGGAGAGAATGTTTTTGTTTCAGCTGCATCTGGTGCAGTTGGTCAACTTGTTGGTCAATTCGCTAAATTGACCGGTTGCTATGTTGTTGGAAGTGCTGGAACTAATGAGAAAGTGGATCTTTTGAAGAATAAATTTGGATATGATGAAGCATTTAACTACAAAGAAGAGCCTGACCTCAATGCAGCATTGAAAAGGTATTTTCCAGAAGGCATTGACATATACTTTGAGAATGTTGGAAGCAAGACACTTGATGCTGTGCTGTTGAATATGAGAGTCCATGGTCGCATACCTGTATGTGGAATGATCTCACAGTATAATCTTACTGAACCTGAAGGTGTAACAAATTTAGCACATATCATATATAAGCGGATTTGTATGCAAGGTTTTGTTGTATTTGATTACTATCACCTTTATACAAAATTCTTGGAGTTTGTCTTGCCTCTTATAAGAGAAGGAAAGGTTGTGTATGTGGAAGACATAGCTGAGGGTCTTGAAAATGGTCCTGCTGCATTGATTGGCTTGTATAATGGTCGCAATGTTGGTAAACAAGTGGTTGTTGTTGCTCATGAGTGA 1233 0.3877 MMHLAFQHCCLLFALMYLRQMGTYQPLICFSHVILAVLIKQGVASNSIVPFLYLMNEQIQHHTNKSEHICDTISEMVQVRNKQVILKDYVSGFPKESDMNIVDSTITLKLPQGSNELLLKNLYLSCDPYMRILMTKDTTAELGAHTPGSPLIGYGVSKVLESEHQDYKKDDLVWGITKWEEYSLIPATGMFKIEHTDVPLSYYTGILAYAGFFELGCPKKGENVFVSAASGAVGQLVGQFAKLTGCYVVGSAGTNEKVDLLKNKFGYDEAFNYKEEPDLNAALKRYFPEGIDIYFENVGSKTLDAVLLNMRVHGRIPVCGMISQYNLTEPEGVTNLAHIIYKRICMQGFVVFDYYHLYTKFLEFVLPLIREGKVVYVEDIAEGLENGPAALIGLYNGRNVGKQVVVVAHE 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00198 410 FunFam Prostaglandin reductase 2 200 376 - -
Trre15g00198 410 Gene3D - 83 405 - -
Trre15g00198 410 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 203 370 IPR036291 -
Trre15g00198 410 SUPERFAMILY GroES-like 353 405 IPR011032 -
Trre15g00198 410 CDD double_bond_reductase_like 79 407 - -
Trre15g00198 410 Gene3D - 206 376 - -
Trre15g00198 410 SUPERFAMILY GroES-like 78 237 IPR011032 -
Trre15g00198 410 PANTHER PROSTAGLANDIN REDUCTASE 79 407 IPR045010 GO:0016628
Trre15g00198 410 Pfam N-terminal domain of oxidoreductase 82 193 IPR041694 -
Trre15g00198 410 Pfam Zinc-binding dehydrogenase 232 365 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00198 Trre-Chr15 1386476 1388845 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00198 K19825 - gmx:100812337 554.288