Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00197 ATGACACAAGTGAGGAACAAGCAAGTGATTCTAAAGGATTATGTGTCTGGTTTTCCTAAAGAATCAGACATGATCATTGTTGACAGTACCATCGCTCTTAAGCTTCCACAAGGTTCCAATGGTTTGCTGCTAAAAAATCTCTACTTGTCTTGTGATCCATACATGCGGATCATGATGACCAAGGACACTACTTCTGAAGTTGGTGCTCTCACCCCTGGTTCTCCAGTGACAGGACTTGGAGTATCTAAAGTTGTAGAATCTGGACATCCAGATTATAAGAAAGATGATTTAATTTGGGGTATGACTAAATGGGAAGAGTATAGCTTGGTCCCTGCAACTGGAATGTTCAAAATTGAGCACACTGATGTCCCACTTTCTTACTATACTGGAATTCTCGGTATGCCGGGAATGACTGCTTATGCAGGTTTGTTTGAAGTAGGCACTCCTCAGAAAGGAGAGAATGTTTTTGTTTCAGCTGCATCTGGTGCAGTTGGTCAACTTGTTGGACAATTCGCTAAGTTAACTGGTTGTTATGTTGTTGGAAGTGCTGGAACTAAAGAAAAGGTGGATTTGTTGAAGGAAAAATTTGGATATGATGAAGCCTTTAACTACAAAGAAGAGCTTGACCTCAATGCAGCATTGAAAAGGTATTTTCCGGAAGGCATTGACATTTACTTTGAGAATGTTGGAGGCAAGACACTTGATGCTGTACTCTTGAATATGAGAGTCCATGGTCGCATACCTGTGTGCGGAATGATTTCACAGTATAATCTTACTCAACCTGAAGGTGTAACAAATTTGGCACATATCATATATAAGCGGATTCGGATGGAAGGTTTTGGTGTATTTGAATACTATCATCTTTATACAAAATTCTTGGAGTTTGTCTTGCCTCTTATAAGAGAAGGAAAGATTGTGTATGTGGAAGACATAGCTGAAGGACTAGAGAATGGCCCTGCAGCATTAGTTGGTCTTTTTAGTGGTCACAATGTTGGTAAACAAGTGGTTGTTGTTACTCATGAGTGA 1026 0.3996 MTQVRNKQVILKDYVSGFPKESDMIIVDSTIALKLPQGSNGLLLKNLYLSCDPYMRIMMTKDTTSEVGALTPGSPVTGLGVSKVVESGHPDYKKDDLIWGMTKWEEYSLVPATGMFKIEHTDVPLSYYTGILGMPGMTAYAGLFEVGTPQKGENVFVSAASGAVGQLVGQFAKLTGCYVVGSAGTKEKVDLLKEKFGYDEAFNYKEELDLNAALKRYFPEGIDIYFENVGGKTLDAVLLNMRVHGRIPVCGMISQYNLTQPEGVTNLAHIIYKRIRMEGFGVFEYYHLYTKFLEFVLPLIREGKIVYVEDIAEGLENGPAALVGLFSGHNVGKQVVVVTHE 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00197 341 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 130 301 IPR036291 -
Trre15g00197 341 Gene3D - 131 307 - -
Trre15g00197 341 Pfam Zinc-binding dehydrogenase 163 296 IPR013149 -
Trre15g00197 341 CDD double_bond_reductase_like 4 338 - -
Trre15g00197 341 Gene3D - 8 336 - -
Trre15g00197 341 SMART PKS_ER_names_mod 41 336 IPR020843 GO:0016491
Trre15g00197 341 FunFam Prostaglandin reductase 2 131 307 - -
Trre15g00197 341 Pfam N-terminal domain of oxidoreductase 7 118 IPR041694 -
Trre15g00197 341 SUPERFAMILY GroES-like 3 168 IPR011032 -
Trre15g00197 341 PANTHER PROSTAGLANDIN REDUCTASE 4 338 IPR045010 GO:0016628
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00197 Trre-Chr15 1383715 1386038 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00197 K19825 - gmx:100811802 563.918