Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00195 ATGGAGGTTGAGTTAGAGCCTCGCGTGAAGCCTCTTCAATTCAAGGTCAAAGCTATGTCTAGAGAATCTCCGTCACAAAAGGCTATTAATGTTCTCGACTCCGACCTTCGTTCTCACTGGTCCACCGCTACTAACACCAAGGAATGGATTCTACTCCAACTCAATGAGCCTTGCTTGTTGTCGCATATACGGATTTATAACAAGTCTGTGCTCGAGTGGGAAATTGCAGTGGGCTTGCGGTACAAGCCAGAGACATTTCAAAAAGTTCGCCCACGTTGCGAAGCACCCAGACGTGACATGATCTACCCTACAAATTACACTCCATGTCAATATGTGAGAATATCTTGTTTGCGTGGAAACCCCATCGCTATTTTCTTTGTTCAGCTAATAGGAGTTCCTGTGGTTGGTCTTGAAGCTGAATTTCAACCAGTTGTTAATTACTTGCTACCACACATTCTATCTCATAAACAGGATCCTCATGATACGCATCTCCAGTTGCTGCAAGACTTGACAAATCGGTTGCTAGTATTTCTTCCACAACTTGAGACAGACCTTGCAAGCTTTCCAGATAATCCTGAATCTAACCTACGGTTTCTTGCCATGCTAGCGGGTCCTTATTATCCTATTCTTCATGTGGCGAATGCAAGGACAACTTCAAAGCATCCAGGCAATATCACTGACTCCGAAGTCTATAGAAGTAATCAACTGTCACCAGCCCTAACTGTTTCCTCTAACTTTGAGCCAAGAAGATCACGAAGTGCATCGTCTTTCAATTTGTCTGCATACCGTTCCATGGTTTTACGGCCAGATAGAATTTTTATGTTGCTGAGAAAGGCTTACAAATATTCTGATCTGGGCTCTGTTTGTAGGATGGCATCTAGAATCTTGCAGAAAATCATTGATCCTGATCCTGAGCAAGATGTATCATACCCTCAAAATGAAGTTATTGCCCCTTTGGAGGAGAAATCAAAATTGGAACTTCCTAGTCCTTGCACTTTTGTTGATTACTCAAACCTGTTTGGTGAGGAGTTCAAAATGCAAGATGAGCACTGGGATTGTAGCTATCTTAATGTACTAGATATTGGGGCAGTGGAAGAAGGGATCTTACATGTTCTTTATTCCTGTGCAGCTCAGCCTGTTCTTTGCAGCAAGATGGCTGAGAGAATTTCAGAATTTTGGGCTGCGCTGCCGCTTGTACAAGCTCTGCTGCCAGCTCTACGCCCATGGTTGAGCAATTCTTTTGATGTTGTGGATGACTCGTTTTCTCAGTGGAATCAACCTATTGTACAACAGGCCTTATCTCAGATCGTTGCTACAGCAACACCGGCTTCCTATCGCTCCCTTCTTCATGCTTGTTCTGGCTATCTATCTTCGTATTCACCATCTCATGCTAGGGCTGCTTGTGTTCTGATTGATTTATGCTCTGGTGTACTAGCACCATGGATTACTCAAGTGATTGCAAAGGTTGATCTTGCTCTGGAACTTTTGGAGGATCTTTTGGGCATAATCCAGGATGCTCACAATTCACTCATTCGTGCTCGGGCTGCCTTGAAGTATATTGTGCTAGCACTTTCTGGGCATGTAGATGACATATTGGGAAAATATAAGGAAGTTAAACTCAGAATCCTCTTTCTTGTGGAGATGCTGGAGCCTTTTCTTGATCCTGCTATTGCTGTATCAAAAAGCAAAATAGCTTTTGGAGATCTATCTTCTTCATTTCCAGAACAGCAAGAGCACAATTGCATGATTTCTCTAAATATCATTCGTGCTGCAGTACAAAAGGCAGCTGTTCTTCCTTCTTTGGAATCAGAATGGAGACATGGGTCGGTGGCTCCTAGTGTGCTTCTCTCGATACTGGAACCACACATGTTACTGCCGCCTGATGTTGATCTTTGCAAATCTGTTTTAAGACCAACTGGACATGAAACTGCATCTGTTTCACCTCTTTCCTCTGGGGTTAATGGTGGAAGTTCTTTTTCCAAGTTCAATAGTCAAGATGAGTCTGATGGCAAAACGGAGGTACCAGAAACAGCAGGAAGATCTGATTTTGTTGAAGACCGTAATCTACTTTTTGCTCCACCAGAGTTGCAGGGCATATCATTGAGAAACAGTTGTAATGTTCCTAACCATAATAGCTCTGTTTCTCATGCTGGGGATATGAGACTGGAATCGCAACATGTGGTTGATAAACATTCTACCCATCGTTTTCTTTCTGATGTTGTCATAGATTCCGGACTTGGTTTTGAATACTTCAATCTGCAGGCAGATTACTTCCAACTTTTAAACTATCATGATTGTGAGCTTCGTGCTTCTGAGTTTCGACGCTTGGCTTTAGATTTGCATTCTCAGAATGATGTCACGGTTGAAACCCATGATGCCGCAATTGATGCTTTTCTGTTGGCAGCAGAATGTCATGTAAACCCTTATTTTATGTTGACTATTGGAGCCGCTTCAAAACTTACAGACCTTTTGAACATAAAGGCAGGTAAAACTGTGCACTCTCATACTAATGTGAATGCAAAAGGGGCTTTTGGAAAAAATAAACCTAACCTAGAAACAATAGCACATATAGAGAGAAAAAGAGATAAACTTGTTTTTCACATTCTGCTTGAGGCTGCCGAGTTGGATAGGAAGTATCATTTAAGAGTATCTGATGGTGAAGGTGGTCCTTATTGTGCTGAAGGTTTTGATGAACAGGTTATCAAGATGTCTTCTCATGATGAGCAACACGCAGATGCTTTAACCTTAGTTCGACAAAATCAAGCTCTACTCTGTAACTTTTTGATCCAACGTTTGCAGAGAGACCAAATTTCAATGCATGAAATTCTCCTGCAAAGCCTTGTGTATTTTTTGCACACTGGTACTAAACTATTTTGCCCTCCAGAAAGTGTGATTGATATCATTTTAAAATATGCTGAAGACTTGAACAAGATGCTGGCATCTTTTCATCATGAGACGAAGGAAGGTAATTTGCATTTGGCACAAGAAAGAACACACGGGGTAGAGCGACGTTGGTTACTTTTACAACAATTGGTTATTGCTTCAAGCAATGGAGGTGAAGAGGAAAATTTTGGAACTAGCATCCAAAATAGTTATCTCTGTGGAAATTTAATTCCCCCTTCAGCATGGATGCAGAGAATTTCTCATTTTTCTTGTTCTGTGTACCCTTTGGTTCGATTTCTGGGGTGGATGGCAGTATCTCGTAATGCCAAACAATATATGAAAGACCAAAGTTTCCTTGCATCTGATCTGTCTCAGCTGACATATTTACTTTCCATTTTTGCTGATGATCTTGCTGTTGTTGATAATGTGATCAATAAAAAGTATGAAGAGGTTAAAATTGAAGATTCACGGGTTGAACATAGTTCCTCAACAAAGAAAGAATTTGAGCGAGGTAACCAATATCACGAAGAACAATCTTTTTCTGCAGTCTACCCTGAACTCTGGAAGTTCTTTCCCAATATGAAAGGGAAATTTGAATCATTTGGAGAAGCCATTTTAGAGGCTGTTGGTTTGCAGCTAAGATCTGTATCTTCCACTCTTGTGCCTGATGTTTTGTGTTGGCTTTCTGAACTGATTTCATGGCCATTTTCTTTCACTTCTTCAATTGGCGGTGATAATTTGAAAGGTTATAATGCGAAGAATGCCAGAACAATAATCCTTTATATACTTGAAGCTATTATAGCTGAGCACATGGAAGCCATGGTTCCTGAGACACCTAAGTTGGTGCATGTGCTTCTGTCACTTTCATGTTCTTCATACTGTGATGTGCCATTTCTTGAATCTGTGTTGTGTTTGTTGAAGCCAATTATTTCTTATTCTTTGTCCAAGGTCTCTCGTGATGAAAGGTTATTGGAAGCTGATTCCTGTCTGAACTTCGAGGAATTATGCTTTAATGTTCTTCTCAGTAAAATCAAACATAAGGATGATATCAAACTTCCTGAAGATAAAGAGTACAATGTAGCACTGGGTATTTTTATTTTGGCTTCAATTTTCCCTGACCTATCTATTCAATATAGAAGGGACTTTTTGCAGTCTTTATTAAGTTTGGTGAACTTTGCTGATTCAGAGCCAACAACTTCTCTCTATGATTATCTCAGTGCATTTCAATGTGTTATGGATAATTGCAAACTACTATTAGTTAATGCATTAACAGCAAGTGGTGTTATTCCTCTTCAGTTGCCCCCTTTTCCTCGTGTGAGTGTTGGTGGGCTTTCTGATGATAACTTACCAAATCCCTGGTTTCTTAGCGATATCTGTCACCATTCATTTGAGAATGATGTGCATAATGTAGAACATAACAATTCTGCTGCTGATGATGATCATTGTCATTTACCTTCTGAAGATTTAGAAGGGTTTTCTAAAGACATTGAGGTTCTCATATCTGAGCTTACTCCAGCTATTGAGCGCTGTTGGAATCTCTATCATCAGATAAGCAGAAAACTAACAATATCATCAGCAGAGTGTTTTGTATTCTCAAAATGTTTGACATCAATTTCTCGAAAATTTCATAAATGTGAAGATGATGATCAAGATTCTTCACTGGCCAAATCATCTGACCTGTTCTCTCGTCATTGGAGAATTGGTGTTCTAGGCCTCTCTGAATTGATCACCGTCCTCCAAGAAAGCAGTTGCTGGGAAGTTTCTTGTATGATGCTTGATTGTTTACTTGGAATACCCTATAGCTTTTCCCTGGATAATGTGGTAGGCATTATATGTACGGCCATAAAGAAAGTTGCTTGCAATGCACCTAAAATCTCTTGGCGTTTGCGGAGCAATAAATGGCTGTCTTATTTGACTGCTAGAGGCATCTATAACACTCGAGAAAGTGAGATTCCTCTCACAGATCTATTTTGTACATTCCTGGGACATGCAGAACCTGAACAACGCATCATAGCAGTTAAACATCTGGGAAGACTTCTTGGCCAGTCTATGAATGGTGAAAGAGAACTGATAAATTCTAGAATTTGCACCGACTTTGTTCCAAATAAGTTAGTTTTATCTATTCCCGATTATGTATTATCTCAGCTGGTTTCAAATACTTGGGATGAGGTTGTTGTGCTGGCATCATCTGATACATCATCACAAATAAGGGTTCATGCAATGGCTCTTCTTTCAAATTATATACCATTTGCCGAGCGCCATCATATACAATCTCTTCTTGTGGCAGCTGATAGCATTTGTTGTTTGCGTAATGCACAACCTTCACATGATGGTTCTATCCTTCAACTTTCATTAGCACTTATTGCTTATGCCTGTCTTTGCTCACCACCCGAAGATATTTCTTTGATTCCTCAAAATGTATGGGAAAATGTTGAAACTTTAGCATCAACAAAATATGATGGCAAGCTTGGAGACCTCGAGAAGAGGACTTGTCAAGTTCTATGTAGATTGAAAGACGGCAATGAGACCAAAGAGGCCCTGAAAGAAGTACTTTCTTCAAATTCTTCAAAGCAGCACGATCCAGATTTTGCTAGCACACGTGAATCTGTGCTCCAGGTCCTTGGCAACTTAAAGGCGGTTCACTCATACTTTGATGTATTCTCTACAAAAATTAACCAAGATGATATGGAGCTAGAGGAGGCTGAGTTGGAACTAGACATTATACAGAAGGAACGTGCATTACCAGGACAAGTGGAGGATTCCAAAAATCGGAATCAAATTACAAGCTCACCCTCCAGCGGAAAGGATGTTTCAAGGCTTCAGCAGATCAGAGAGTGCATTCGTACCCTAGAAAAGTCCAAACTTAAGGAAGATATCCTAGCCCGTAGGCAAAAGAAACTACTTATAAGACATGACCGTCAAAAATATTTGGAAGAAGCAGCATTACGGGAAGCAGAAATTCTGCAAGAACTTGATAGGGAGAGAGTGGCTGAAATGGAGAAAGAGATGGAAAGACAAAAGTTATTAGAAATAGAGCGTGCTAAAACAAGGGAACTGCGTCACAATCTTGATATGGAGAAAGAGAGACAAACACAGAGGGAGCTTCAGCGTGAAATAGAGCAAGCGGAATCAGGAATTCGGCCATCTCGGCGTGACTTTCCTTCCTCCACTCACAATAGTCGACCCAGGGATAGATTTCGGGAAAGAGACAATGGGAGATCTGGTAATGAAGGGAGCACTAGAGTTGGCCCTGGAAGCTTACAATCTGAAATCCCGTCCACCAATTCATCAATGACAGCCTCACCAACTATAGTTCTTTCTGGCTCACGGACATTTTCAGGCCAGATGCCAACTATCTTACAGTCACGTGACCGACAGGATGACTGTGGCAGCATATATGAAGAGAATGTTGATGGAAGCAAGGATTCGGGCGATACCGGCAGCATTGGAGATCCAGAATTGGCATCAGCATTTGATGGCCAGTCTGGTGGGTATGGGTCCCAAAGACATAGTTCAAGGGGAAGCAAGTCAAGGCAACTAGGTGAACGTAGAGACAGCAGAGAAAACAGGCGTGAAGGGAAATGGGAAAGGAAACATTGA 6483 0.41 MEVELEPRVKPLQFKVKAMSRESPSQKAINVLDSDLRSHWSTATNTKEWILLQLNEPCLLSHIRIYNKSVLEWEIAVGLRYKPETFQKVRPRCEAPRRDMIYPTNYTPCQYVRISCLRGNPIAIFFVQLIGVPVVGLEAEFQPVVNYLLPHILSHKQDPHDTHLQLLQDLTNRLLVFLPQLETDLASFPDNPESNLRFLAMLAGPYYPILHVANARTTSKHPGNITDSEVYRSNQLSPALTVSSNFEPRRSRSASSFNLSAYRSMVLRPDRIFMLLRKAYKYSDLGSVCRMASRILQKIIDPDPEQDVSYPQNEVIAPLEEKSKLELPSPCTFVDYSNLFGEEFKMQDEHWDCSYLNVLDIGAVEEGILHVLYSCAAQPVLCSKMAERISEFWAALPLVQALLPALRPWLSNSFDVVDDSFSQWNQPIVQQALSQIVATATPASYRSLLHACSGYLSSYSPSHARAACVLIDLCSGVLAPWITQVIAKVDLALELLEDLLGIIQDAHNSLIRARAALKYIVLALSGHVDDILGKYKEVKLRILFLVEMLEPFLDPAIAVSKSKIAFGDLSSSFPEQQEHNCMISLNIIRAAVQKAAVLPSLESEWRHGSVAPSVLLSILEPHMLLPPDVDLCKSVLRPTGHETASVSPLSSGVNGGSSFSKFNSQDESDGKTEVPETAGRSDFVEDRNLLFAPPELQGISLRNSCNVPNHNSSVSHAGDMRLESQHVVDKHSTHRFLSDVVIDSGLGFEYFNLQADYFQLLNYHDCELRASEFRRLALDLHSQNDVTVETHDAAIDAFLLAAECHVNPYFMLTIGAASKLTDLLNIKAGKTVHSHTNVNAKGAFGKNKPNLETIAHIERKRDKLVFHILLEAAELDRKYHLRVSDGEGGPYCAEGFDEQVIKMSSHDEQHADALTLVRQNQALLCNFLIQRLQRDQISMHEILLQSLVYFLHTGTKLFCPPESVIDIILKYAEDLNKMLASFHHETKEGNLHLAQERTHGVERRWLLLQQLVIASSNGGEEENFGTSIQNSYLCGNLIPPSAWMQRISHFSCSVYPLVRFLGWMAVSRNAKQYMKDQSFLASDLSQLTYLLSIFADDLAVVDNVINKKYEEVKIEDSRVEHSSSTKKEFERGNQYHEEQSFSAVYPELWKFFPNMKGKFESFGEAILEAVGLQLRSVSSTLVPDVLCWLSELISWPFSFTSSIGGDNLKGYNAKNARTIILYILEAIIAEHMEAMVPETPKLVHVLLSLSCSSYCDVPFLESVLCLLKPIISYSLSKVSRDERLLEADSCLNFEELCFNVLLSKIKHKDDIKLPEDKEYNVALGIFILASIFPDLSIQYRRDFLQSLLSLVNFADSEPTTSLYDYLSAFQCVMDNCKLLLVNALTASGVIPLQLPPFPRVSVGGLSDDNLPNPWFLSDICHHSFENDVHNVEHNNSAADDDHCHLPSEDLEGFSKDIEVLISELTPAIERCWNLYHQISRKLTISSAECFVFSKCLTSISRKFHKCEDDDQDSSLAKSSDLFSRHWRIGVLGLSELITVLQESSCWEVSCMMLDCLLGIPYSFSLDNVVGIICTAIKKVACNAPKISWRLRSNKWLSYLTARGIYNTRESEIPLTDLFCTFLGHAEPEQRIIAVKHLGRLLGQSMNGERELINSRICTDFVPNKLVLSIPDYVLSQLVSNTWDEVVVLASSDTSSQIRVHAMALLSNYIPFAERHHIQSLLVAADSICCLRNAQPSHDGSILQLSLALIAYACLCSPPEDISLIPQNVWENVETLASTKYDGKLGDLEKRTCQVLCRLKDGNETKEALKEVLSSNSSKQHDPDFASTRESVLQVLGNLKAVHSYFDVFSTKINQDDMELEEAELELDIIQKERALPGQVEDSKNRNQITSSPSSGKDVSRLQQIRECIRTLEKSKLKEDILARRQKKLLIRHDRQKYLEEAALREAEILQELDRERVAEMEKEMERQKLLEIERAKTRELRHNLDMEKERQTQRELQREIEQAESGIRPSRRDFPSSTHNSRPRDRFRERDNGRSGNEGSTRVGPGSLQSEIPSTNSSMTASPTIVLSGSRTFSGQMPTILQSRDRQDDCGSIYEENVDGSKDSGDTGSIGDPELASAFDGQSGGYGSQRHSSRGSKSRQLGERRDSRENRREGKWERKH 2160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00195 2160 Coils Coil 1943 1963 - -
Trre15g00195 2160 MobiDBLite consensus disorder prediction 642 679 - -
Trre15g00195 2160 MobiDBLite consensus disorder prediction 1981 2008 - -
Trre15g00195 2160 MobiDBLite consensus disorder prediction 2037 2086 - -
Trre15g00195 2160 MobiDBLite consensus disorder prediction 2088 2102 - -
Trre15g00195 2160 Coils Coil 1986 2006 - -
Trre15g00195 2160 MobiDBLite consensus disorder prediction 642 665 - -
Trre15g00195 2160 MobiDBLite consensus disorder prediction 2015 2036 - -
Trre15g00195 2160 SUPERFAMILY Galactose-binding domain-like 12 121 IPR008979 -
Trre15g00195 2160 CDD UDM1_RNF168_RNF169-like 1951 2004 - -
Trre15g00195 2160 PANTHER GALACTOSE-BINDING DOMAIN-LIKE, ARMADILLO-TYPE FOLD PROTEIN-RELATED 1 2160 - -
Trre15g00195 2160 MobiDBLite consensus disorder prediction 1875 1900 - -
Trre15g00195 2160 MobiDBLite consensus disorder prediction 2136 2160 - -
Trre15g00195 2160 MobiDBLite consensus disorder prediction 1981 2160 - -
Trre15g00195 2160 Pfam XRCC1 N terminal domain 15 82 IPR002706 GO:0000012|GO:0003684|GO:0005634
Trre15g00195 2160 Coils Coil 1852 1872 - -
Trre15g00195 2160 Gene3D - 9 138 - -
Trre15g00195 2160 MobiDBLite consensus disorder prediction 1880 1900 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00195 Trre-Chr15 1354169 1377831 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00195 - - tpra:123882956 4042.66