Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00188 ATGTTACCACAATCACTCTCACCCTTTCGCCCTCTTTCTTCTTCTTCTTCTTCTTCTTCATTTTCCCAAGCAGTAGTAGCAGAACAGCAACATGAACAACAACAAAAGCCACAGCAACTACGAAGCTCACAACTTGTCTCATTGGAATATGCTGACCTTAACCTCTCTTACGATTTGAATCTGGGTCATGGCAGAATCAGGCAACATGTCAATCCTTTCAGTCCTTCTTTCTCTACTCCTGCACAAGTACCAGACTGGAGCCAGGTCTTTGCAGACCCTGCATTGCCACTCATGGTGGATATTGGATGTGGCAGCGGCAGGTTTCTTATGTGGCTTGCAAAAAGAACACCTAAAGTAAGAAATTATTTGGGATTGGAAATACGGCGAAAGATGGTCAAGCGTGCTGAGGTATGGGTAAAAGATCTGGCTCTGGATAACATACATTTCTTGTTTGCAAATGCCCCAATTTCTTTCAAGCAGTTGGTAGAATCATATCCTGGACCCTTACAGTTAGTTTCAGTTTTGTGTCCAGACCCTCATTTCAAGAAAAAACATCATAAAAGAAGAGTTCTGCAGAAGCCTTTGGTTGGTGCTATTGTAGATCATTTAACTCCTGGGGGACAGGTGCTTGTGCAGTCTGATGTGCTTGAAGTGGCACTTGACATGAAAGACCAGCTTGATGAAGTTGATGCACTTAGTCACATAGATGCTTTGAACCGCGATATATTGTGTGATAGTGAAGGATGGTTATTAAGCAACCCTATGGGGATTAGGACTGAGAGAGAGATTCATGCAGAATTCGAAGGAGCGAAAATCTATCGAAGGTTGTACGAGAAGAAGCAGATGTGA 849 0.4299 MLPQSLSPFRPLSSSSSSSSFSQAVVAEQQHEQQQKPQQLRSSQLVSLEYADLNLSYDLNLGHGRIRQHVNPFSPSFSTPAQVPDWSQVFADPALPLMVDIGCGSGRFLMWLAKRTPKVRNYLGLEIRRKMVKRAEVWVKDLALDNIHFLFANAPISFKQLVESYPGPLQLVSVLCPDPHFKKKHHKRRVLQKPLVGAIVDHLTPGGQVLVQSDVLEVALDMKDQLDEVDALSHIDALNRDILCDSEGWLLSNPMGIRTEREIHAEFEGAKIYRRLYEKKQM 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00188 282 PANTHER 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE 41 279 IPR003358 GO:0006400|GO:0008176
Trre15g00188 282 Gene3D Vaccinia Virus protein VP39 66 282 IPR029063 -
Trre15g00188 282 ProSiteProfiles SAM-dependent methyltransferase TRMB-type domain profile. 54 279 IPR003358 GO:0006400|GO:0008176
Trre15g00188 282 Pfam Putative methyltransferase 96 273 IPR003358 GO:0006400|GO:0008176
Trre15g00188 282 FunFam tRNA (Guanine-N(7)-)-methyltransferase 65 282 - -
Trre15g00188 282 CDD AdoMet_MTases 99 212 - -
Trre15g00188 282 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 93 236 IPR029063 -
Trre15g00188 282 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00188 Trre-Chr15 1322748 1325440 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00188 K03439 - gmx:100788255 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00188 15 1322748 1325440 Trre15g00188 15 1322748 1325440 ECH