Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00186 ATGGCGGTGAGACAAAGAGCAGTAACAGCGCTTCCAAACCTCATACGCACTCTCCGCAACGAACAACCTTTCAAACTCAAACCTCCTAACAATCCCAATCATCCCAATCACAATTCCTTACCCTCTCTCCGACGCGCTTTCTCTTTATACGATCAGATCAACCTCATTGACAATGTCCCTGAAGACCAACTCCGATTTCAAGGGTTTAATGATACTGGTTTTACTGTAAATGGAGTTGAATATGAAGGAAGTTTACTTTGTGTTGGAAATTTGATCATGTCTTGGAAACCAAAGAAGTTTTCAGAGATCACTGCTGATAGCTTGTCACTCTTTCAAATTGTCCGCCCAATTCCAGAGATTCTAATTGTTGGCTGTGGAAGGAACATTCAACATGTTGATCCTGAACTAAGACGGTTTATTCGATCTACTGGCATGAAGTTAGAAGCTGTTGACTCGAGAAACGCAGCCTCAACTTACAACATATTGAATGAAGAAGGTCGTATTGTGGCTGCCGCGCTTCTTCCATATGGAGTTTCTTCATGA 543 0.4217 MAVRQRAVTALPNLIRTLRNEQPFKLKPPNNPNHPNHNSLPSLRRAFSLYDQINLIDNVPEDQLRFQGFNDTGFTVNGVEYEGSLLCVGNLIMSWKPKKFSEITADSLSLFQIVRPIPEILIVGCGRNIQHVDPELRRFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00186 180 FunFam NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 50 176 - -
Trre15g00186 180 Pfam Protein of unknown function (DUF498/DUF598) 67 174 IPR007523 -
Trre15g00186 180 CDD Mth938_2P1-like 54 177 IPR034095 GO:0032981
Trre15g00186 180 SUPERFAMILY MTH938-like 53 176 IPR036748 -
Trre15g00186 180 Gene3D - 50 176 IPR036748 -
Trre15g00186 180 PANTHER NUCLEAR PROTEIN E3-3 18 178 IPR007523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00186 Trre-Chr15 1317920 1321029 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00186 K09008 - gmx:100816956 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00186 15 1317920 1321029 Trre15g00186 15 1317920 1321029 ECH