Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00185 ATGTCCACTCTACTTCAATCCTCTTTCATTTCTTCTTCGTTCTCTCCTTCCCCTCGCATCTCCCTTCGTAACGCCGTCAGATGTAACAACAATGTAGTTCAATCTGTGAATTTGGAGAACGGAAAGCCATATCGTTCAACACAATCATCTCCACTTAACGTTACAAGTTCCATTCCCAGTTTTCTTCTCGCTCCAGATACTCGCGGCATCCATGATCTCGTTAACAAGAATCGTCTTCGTATTTTCTCCGGCACCGCTAATCCTGCACTCGCTCAGGAAATTTCATGCTATATGGGCCTGGATCTGGGAAAAATTAAGATAAAACGTTTTGCTGATGGCGAGATATATGTCCAACTGCAAGAGAGTGTCAGGGGGTGTGATGTGTTTCTCGTGCAGCCCACTTGTCCTCCTGCGAATGAGAATCTTATGGAGCTTCTTGTAATGATTGATGCATGTAGGAGAGCTTCAGCCAAAACTATTACTGCGGTCATTCCGTATTTTGGATATGCTAGAGCTGATAGAAAGACTCAAGGGCGTGAATCAATTGCTGCTAAGCTTGTAGCAAATTTAATCACAGAAGCAGGAGCAAATCGTGTTCTTGCATGTGACCTCCACTCTGGGCAGTCTATGGGCTACTTTGATATTCCAGTTGATCATGTGTATGGTCAGCCTGTTATACTCGATTACCTTGCCAGCAAGACTATTTGTTCGGATGATTTGGTAGTTGTCTCGCCAGATGTTGGTGGTGTGGCTAGAGCACGTGCTTTTGCCAAAAAGTTATCGGATGCTCCTTTAGCTATTGTTGATAAAAGGCGTCATGGACATAATGTTGCGGAGGTGATGAATTTGATAGGTGATGTAAAGGGAAAGGTAGCAGTTATGGTAGATGACATGATTGATACTGCGGGGACCATCTCCAAAGGTGCGGCTCTGTTGCATCAAGAAGGGGCAAGAGAAGTCTATGCATGCACTACACACGCTGTTTTCAGCCCTCCTGCTATAGAGAGATTGTCAAGCGGTTTATTTCAAGAAGTTATCATAACTAATACAATTCCACTGGCAGAGAAGAACTATTTCCCCCAGTTAACAGTGTTATCAGTGGCAAACCTTCTGGGCGAGACCATATGGCGTGTTCATGATGACTGCTCAGGTGGAATTGAACCTTTTTCCAGTTTGGGCATTGATTGA 1188 0.4428 MSTLLQSSFISSSFSPSPRISLRNAVRCNNNVVQSVNLENGKPYRSTQSSPLNVTSSIPSFLLAPDTRGIHDLVNKNRLRIFSGTANPALAQEISCYMGLDLGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLVMIDACRRASAKTITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTISKGAALLHQEGAREVYACTTHAVFSPPAIERLSSGLFQEVIITNTIPLAEKNYFPQLTVLSVANLLGETIWRVHDDCSGGIEPFSSLGID 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00185 395 ProSitePatterns Phosphoribosyl pyrophosphate synthase signature. 203 218 IPR000842 GO:0000287|GO:0004749|GO:0009156|GO:0044249
Trre15g00185 395 Gene3D - 82 380 IPR029057 -
Trre15g00185 395 SMART Pribosyltran_N_2 79 195 - -
Trre15g00185 395 Pfam Phosphoribosyl synthetase-associated domain 280 383 IPR005946 GO:0000287|GO:0004749|GO:0009165
Trre15g00185 395 Gene3D - 222 365 IPR029057 -
Trre15g00185 395 CDD PRTases_typeI 238 350 IPR000836 -
Trre15g00185 395 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER 78 383 IPR005946 GO:0000287|GO:0004749|GO:0009165
Trre15g00185 395 Pfam N-terminal domain of ribose phosphate pyrophosphokinase 79 195 IPR029099 -
Trre15g00185 395 SUPERFAMILY PRTase-like 144 380 IPR029057 -
Trre15g00185 395 NCBIfam ribose-phosphate diphosphokinase 80 382 IPR005946 GO:0000287|GO:0004749|GO:0009165
Trre15g00185 395 Hamap Putative ribose-phosphate pyrophosphokinase [prs]. 79 389 IPR037515 GO:0004749
Trre15g00185 395 FunFam Ribose-phosphate pyrophosphokinase 82 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00185 Trre-Chr15 1310903 1315861 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00185 K00948 - gmx:100789585 656.751