Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00181 ATGGCTTCAAGACCCGGAATCCTCTCTGATTGGCCATGGAAGCCTCTTGGTAGCTACAAGTATGTTGTACTAGCTCCTTGGATCATTCATAGCACTTATTCAGTGATGGTGAAGGATAAGAGTGAAAGGGATGTATCAACTTCTCTAATATTTCCATTTTTGTTATGGCGTGTTATTCATAATCAAATATGGATTACTCTTTCTCGTTATCGAACTGCTAAAGGGAACAATAGAATTCTTGACAAAGGAATTGAATTTGATCAAGTTGATAGAGAAAGAGATTGGGATGACCAAATATTGTTCAATGGGTTACTATATTATTTGGCATGCTATACCTTACAAGGGGCATCACGTCTTCCACTGTGGAGAACAGATGGAGCTATAATTGCCACATTACTTCATGTGGGACCAGTGGAGTTTCTATATTATTGGTTACACAGAGCACTTCATCATCATTTTCTCTATTCTAGATATCATTCTCATCACCATTCTTCCATTGTTACTGAACCAATCACTTCTGTCATCCATCCATTTGCGGAACACATATCATATTTCCTTCTATTTGCAATACCCAAGATGACCCTTGTCTTAACAAATAGAGCTTCTCTTGTTGTCATGGTTGGATATGTCACTTACATTGATTTTATGAATAACTTGGGTCATTGCAACTTTGAGATTATTCCTAAGTGGCTTTTTGATATCTTCCCACCTCTCAAGTATCTCATGTACACCCCCTCGTATCACTCTTTGCACCATACTCAATTTAGAACAAACTACTCACTTTTTATGCCACTTTATGACTATATTTATGGGACAATGGACAAGGCTTCAGATGAATTGCATGAATCAGCATTGAAAAGGAAGGAAGAGACACCCAATGTGGTCCATATAACTCATTTAACAACCCCTGAATCCATCTATCATCTAAGATTTGGATTTGCTTACTTGGCTTCTAAGCCATACACATCAAAATGGTACCTTTGGTTGATGTGGCCTGTTACAGCTTGGTCCATGTTGCTCACATGGGTCTATGGTCGCACATTTATTGTAGAAAGAAATCGTTTTGATGACAAACTCAACCTTCAAACTTGGGCAATACCTAAGTACACACTACAGTACTTAATGCAATGGCAAAATGTTCCTATCAACAAAATGATTGAGGAAGCAATACTTGATGCTGACAAAAAGGGAATAAAAGTGGTGAGCCTAGGTCTAATGAATCAAGGGGAAGAGCTTAACATGTATGGAGGGTTATATGTTGGTAGGAATCCAAAGCTTAATGTTAAGATTGTAGATGGTAGCAGTCTTGCTGTTGCTACTGTTCTTAATAGCATTCCAAAAGGAACAACTCAAGTATTACTTAGAGGAAAACTCACCAAAGTTGCTTATGCTATTGCTTTCACATTGTGCCAACAAGGAGTTCAGGTAGCTACAATGCATGAGGATGATTATATGAAGCTCAGAAAATCATTGATCAATAGCTCTGAAACAAATTTGGTCAATACAAAAAGTTACCCTCAGATGGTTTGGTTAGTGGGAGATGGATTGACTGAAGAGGAACAAATGAAGGCACCAAAAGGAACATTATTTATTCCATACTCACAATTTCCACCAAAGAAACATCGTAAGGATTGCTCATATAATTTCACACCAGCAATGCAAACTCCCACTTCTATTGAAAATGTCCATTCTTGTGAGGATTGGTTGCCAAGGAAGGTAATGAGTGCATGGCGCATAGCTGGAATAGTGCACTCTATAGAAGGATGGAATGAACATGAGTGTGGCTACAAAATGCATAACATAGACAAAGTTTGGCATTCAGCTCTTAAACAAGGATTCCAACCTCTAAATGTTCCACTTAAAAAAATTAGCTAA 1875 0.3792 MASRPGILSDWPWKPLGSYKYVVLAPWIIHSTYSVMVKDKSERDVSTSLIFPFLLWRVIHNQIWITLSRYRTAKGNNRILDKGIEFDQVDRERDWDDQILFNGLLYYLACYTLQGASRLPLWRTDGAIIATLLHVGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAEHISYFLLFAIPKMTLVLTNRASLVVMVGYVTYIDFMNNLGHCNFEIIPKWLFDIFPPLKYLMYTPSYHSLHHTQFRTNYSLFMPLYDYIYGTMDKASDELHESALKRKEETPNVVHITHLTTPESIYHLRFGFAYLASKPYTSKWYLWLMWPVTAWSMLLTWVYGRTFIVERNRFDDKLNLQTWAIPKYTLQYLMQWQNVPINKMIEEAILDADKKGIKVVSLGLMNQGEELNMYGGLYVGRNPKLNVKIVDGSSLAVATVLNSIPKGTTQVLLRGKLTKVAYAIAFTLCQQGVQVATMHEDDYMKLRKSLINSSETNLVNTKSYPQMVWLVGDGLTEEEQMKAPKGTLFIPYSQFPPKKHRKDCSYNFTPAMQTPTSIENVHSCEDWLPRKVMSAWRIAGIVHSIEGWNEHECGYKMHNIDKVWHSALKQGFQPLNVPLKKIS 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00181 624 Pfam WAX2 C-terminal domain 452 615 IPR021940 -
Trre15g00181 624 Pfam Fatty acid hydroxylase 134 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
Trre15g00181 624 PANTHER STEROL DESATURASE 21 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00181 Trre-Chr15 1275357 1285907 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00181 1 616 Lipid Metabolism Gene Families AT1G02190 57.624 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00181 K15404 - gmx:100818020 1085.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00181 15 1275357 1285907 Trre15g00181 15 1275357 1285907 ECH