Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00176 ATGGCTTCCAAACCTGGCATACTTACTGATTGGCCATGGACACCTCTTGGGAGTTTCAAGTGGGTGATTTTGACACCATTTGTAGCAAAAAGCACATACTCTTTCATAGTGAATGATCCAAAGGAAAAAGACCTAAGTAACTTCCTCATCTTCCCATATATGATGGTGAGGATGCTACATGACCAAATATGGATCACTCTTTCTCGCCATCGAACCGCCAAAGGTAAAAACAGAATCATCGACAAGGGAATTGAGTTCGAACAAGTTGATCGAGAAAGCAATTGGGATGATCAAATATTGTTCAATGCATTGGTGTTTTATATTGGTCAAATGTTGATTCCAGAGTCTTGTAAACTACCCATATGGAGAACAGATGGTGTTATTGTAACAATTCTTCTACATGCTGGACCAGTGGAATTTCTTTACTATTGGTTACATAGAGCACTTCATCATCATTTTCTGTATTCTAGATACCATTCTCATCATCATTCTTCCATTGTTACTGAACCAATAACTTCCGTAATACATCCATTTGCAGAACACATAGCATACTTTATGCTATTTGCCATTCCATTATTAACAACAGCATTTACAAAAACAGCCTCAATAGCATCATTTGCTGGTTATCTTGCCTACCTTGATTTCATGAACAATTTGGGTCATTGTAACTTTGAGTTCATTCCAAGCACCATCTTCTCCATATTTCCTTTCCTCAAGTATACCATGTATACACCATCGTTCCACTCACTGCATCATACACAATTTCGGACTAACTATTCACTCTTCATGCCAATTTATGATTACATTTATGGAACTGTTGACAAAGCTTCAGACACATTATATGAAAAATCATTGAAGAAAGAAGAAGGTACACCAGATGTGGTACATTTAACACATCTTACAACTCCTGAATCAATTTATCATCTAAGGTTGGGATTTTCTTCCTTAGCCTCCTCACCACAATCTTCTCAATGGTACCTCTATTTCATGTGGCCATTCACTTTTTGGTCTGTTCTTGTGACTTGGTTTTATGGTAAAACATTTGTTTTGGAGAGGAACTCTTTTAATATGCTCAATTTGCAATCATGGGTTATACCAAGATTCCATGTACAATATCTTTTTAAATGGCAAAGAGAAACATTGAATAAACTTATAGAAGAAGCGATTCTTCAAGCAGAGTCGAGCAAAGCTAAGGTTCTAAGTTTAGGTCTTTCAAATCAGGGAGATTTGCTTAATGGATATGGTGAACTATACATCAAAAGGCATCCCCAACTTAAGACAAAAATTGTTGATGGCAGTAGCTTGGTTGTGGCTATTGTTCTAAACAGCATTCCAAAAGAAACAAATCATGTGTTTCTTTGTGGTAGACTTGACAAGGTTTCATATGCCATTGTCAATGCTTTATGTGAAAAGGGTACTAAGGTTACAACAATGTACAGAGATGATTATGAGAATCTTCAGTTAAGACTCTCCTCTGAATCAAAAAATAATTTGGTTTTCCCTGGATCAAACTCTGCAAAGATATGGCTAGTAGGAGACCAATGTGATGAGGTAGAACAAAAAAATGCACCAAAAGGATCATTGTTGATACCATTTTCCCAATTTCCTCCAAAGAAATTGCGAAAAGATTGCTTCTATCTTAGCACACCAGCCATGATAGCTCCCTCTTCTTTAGTCAATGTCCACTCATGTGAGAATTGGCTGCCAAGAAGAGTCATGAGTGCATGGCGTATCGCTGGAATATTGCATGCCTTAGAAGGTTGGGATGTTCATGAATGTGGAGAAGTCATGTTTAGCATTGAGAAAGTATGGCAAGCAAGTCTTCATCATGGGTTTAGGCCATTGAAGATTAATCATCGCCTTGCTTGA 1869 0.374 MASKPGILTDWPWTPLGSFKWVILTPFVAKSTYSFIVNDPKEKDLSNFLIFPYMMVRMLHDQIWITLSRHRTAKGKNRIIDKGIEFEQVDRESNWDDQILFNALVFYIGQMLIPESCKLPIWRTDGVIVTILLHAGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFMLFAIPLLTTAFTKTASIASFAGYLAYLDFMNNLGHCNFEFIPSTIFSIFPFLKYTMYTPSFHSLHHTQFRTNYSLFMPIYDYIYGTVDKASDTLYEKSLKKEEGTPDVVHLTHLTTPESIYHLRLGFSSLASSPQSSQWYLYFMWPFTFWSVLVTWFYGKTFVLERNSFNMLNLQSWVIPRFHVQYLFKWQRETLNKLIEEAILQAESSKAKVLSLGLSNQGDLLNGYGELYIKRHPQLKTKIVDGSSLVVAIVLNSIPKETNHVFLCGRLDKVSYAIVNALCEKGTKVTTMYRDDYENLQLRLSSESKNNLVFPGSNSAKIWLVGDQCDEVEQKNAPKGSLLIPFSQFPPKKLRKDCFYLSTPAMIAPSSLVNVHSCENWLPRRVMSAWRIAGILHALEGWDVHECGEVMFSIEKVWQASLHHGFRPLKINHRLA 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00176 622 Pfam WAX2 C-terminal domain 451 614 IPR021940 -
Trre15g00176 622 PANTHER STEROL DESATURASE 14 614 - -
Trre15g00176 622 Coils Coil 378 398 - -
Trre15g00176 622 Pfam Fatty acid hydroxylase 137 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00176 Trre-Chr15 1243798 1250585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00176 1 615 Lipid Metabolism Gene Families AT1G02190 56.320 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00176 K15404 - gmx:100790115 1068.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00176 15 1243798 1250585 Trre15g00176 15 1243798 1250585 ECH