Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00175 ATGTTAAAGGGTAGGTTATTGTTTTTTGGAGGTGGAGATTCTCGTTCAGAAGATAAGAATTCATCAAAGAAAGAAGTGGTTGTTCCTACATTGAAGGTTGAAACTGATAAACAAGTTTATAGACCTGGTGATCCAGTTATTGTTACTATTCAGATCTCAAATCCTTCAAATGAGTATTCTTTTTTGATGGAAAGACTTGGTTTTGAGATCAGAGGGATTGAGAAATTGGATACTCAATGGTTTGTTACTCAGAAGCCTATGCCTGGTTCAAGGCAAAGAAGAGGTGAACATGTTTTTATTGACTCTTCAACACCAATCCTAGTAGCAAACCAGATTATTAATGCCAGAGCAAGCAAATCATATGTTGTGAGAACAATGCTGCCTAGCATTATTCCACCATCATACAAGGGTTCAAACATTCGCTATTTGTATTATGTTAGAAGTTCAGTAACCGGAGGGTGGCTGATACTGGAAAATGGGCAATCTCGCACAGAGCCAACAAACGATGTCACTGATTTGGAAGTTCGGGTTCCATTACAAATATGGGTAAACCAGAAAAGCAGTGGCTTTCCAATGGATGATGATATTGTTCCCTCAGCTACTGTACAACTGGATATATTTTGGAAAGAGATCGATGGAGATGCCGATTGGGTTAGAGCAAATGATATTGATGATGGTGTTGAGGAGGGTTATGACAGCTCAAGGGATGATATCTCATCTGTTTCTTCATATAACCCAAATATGGTCAGAGGCTTTGGAAGTTCTTTATCATTGCGATCTTCTTCTGCTAGATCATTGAACAGGGATGCTTTAGAAGGTCACCGAACAAGTTTATCTTCAAATATAGCACTTCCCCGGTTGTCTGTTGCTGAAGTATTATCCGACTCTGGTGGTGATGCCTTATCAACCCAGAAGTCATTTACCATGGTCTCCCCAAGTGAGCAACAGAAGTTCGGAAAGCCTGCAGAAGATGATGCAGGAGTCTCCTCTTCACCGGAAGCTGGAGCCGTTGAACCTTTATCATCAGAAGGCTTTGTTAGAGGAAGGTCTTATAACATCAGACTCGATGATCAAGTTTTGCTGAAATTTTCCCCTAAGAATTCCGACTCAACTTATTACTTCAGCGACATGATAGGTGGGACTCTAACTTTCTTTCACGAGGAAGGAGCTAGGAGATGCCTTGAGATCTCAGTAACATTGGAAACTTCAGAAACTATAAATAGACGCTTCGTTCATCCTTCTAGAAGGAATTCCCCAACAATCACAAAGGTTCAGAGTGATCATCATGAGGTTGTTGCAGATTTGATCCAGACAAGTTTCCTTTTTTCTGTCCCTGTGGATGGTCCAATGACCTTCTCCACTCCGCATGTATCTGTACAATGGGTTCTCCGCTTCGAGTTTTACACAACTCCAAAATATTTGGATTGGACAAAGTACGAGCATCCACTTCTGATTGAAGGAAGGGAAAAAACTGAATGGGTTCTTCCAATTACTGTACATGCTCCACCACCTAGAACTCCTACTTCTGGCTCAAGAAATGAGAAACTTTTCTCGCTGGATCCTATGTGGGTGAACACTTGA 1581 0.4105 MLKGRLLFFGGGDSRSEDKNSSKKEVVVPTLKVETDKQVYRPGDPVIVTIQISNPSNEYSFLMERLGFEIRGIEKLDTQWFVTQKPMPGSRQRRGEHVFIDSSTPILVANQIINARASKSYVVRTMLPSIIPPSYKGSNIRYLYYVRSSVTGGWLILENGQSRTEPTNDVTDLEVRVPLQIWVNQKSSGFPMDDDIVPSATVQLDIFWKEIDGDADWVRANDIDDGVEEGYDSSRDDISSVSSYNPNMVRGFGSSLSLRSSSARSLNRDALEGHRTSLSSNIALPRLSVAEVLSDSGGDALSTQKSFTMVSPSEQQKFGKPAEDDAGVSSSPEAGAVEPLSSEGFVRGRSYNIRLDDQVLLKFSPKNSDSTYYFSDMIGGTLTFFHEEGARRCLEISVTLETSETINRRFVHPSRRNSPTITKVQSDHHEVVADLIQTSFLFSVPVDGPMTFSTPHVSVQWVLRFEFYTTPKYLDWTKYEHPLLIEGREKTEWVLPITVHAPPPRTPTSGSRNEKLFSLDPMWVNT 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00175 526 Pfam Rgp1 114 469 IPR014848 -
Trre15g00175 526 MobiDBLite consensus disorder prediction 308 341 - -
Trre15g00175 526 PANTHER REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATED 29 507 IPR014848 -
Trre15g00175 526 SUPERFAMILY E set domains 30 154 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00175 Trre-Chr15 1236530 1242144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00175 K20477 - gmx:100795634 845.884