Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00174 ATGGGAAGTGTTGAAACCTCAAACAAGGATACAAATGGAAGCCTGCTAAGCAAAAATCCTACAATTGTGTTTGTGTTAGGTGGCCCTGGCAGTGGAAAGGGTACCCAATGTGCAAATGTTGTCGAACATTTTGGGTATACGCACCTCAGTGCTGGTGATCTTCTGAGAGCAGAAATCAAATCCGGCTCTGAAAATGGCACAATGATCCAGAATATGATTAAAGAAGGAAAAATTGTTCCCTCCGAGGTAACAATTAAGCTTCTACAACGAGCAATTCAGGAAAGTAGCAATGATAAATTTCTTATTGATGGTTTTCCTCGCAATGAGGAAAACCGTGCAGCATTTGAGAAAGTGACAGGAATAGAGCCAACATTTGTCCTATATTTTGATTGCCCAGAGGAAGAGATGGAGAGACGACTTCTTAGTAGGAACCAGGGTAGAGAAGATGACAACATTGAAACAATAAGGAAGCGGTTCAAGGTTTTCTTGGAGTCTAGCCTCCCTGTGATTAATTATTATGATGCAAAGGGAAAAGTTCGCAAGATTGATGCTGCAAGGCCTGTTGAAGAGGTATTTGAGTCTGTCAAAGGAATTTTTGGTCCAAAAACTGAAAAGGTAAATCACTATGTTCGCTTTATGTCAAAACTTTATATGTACAAGTTCCATTTTCTGTCAAAGAGAAAATTTGGAAATCAATGTCATTATTGTTAA 711 0.391 MGSVETSNKDTNGSLLSKNPTIVFVLGGPGSGKGTQCANVVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQRAIQESSNDKFLIDGFPRNEENRAAFEKVTGIEPTFVLYFDCPEEEMERRLLSRNQGREDDNIETIRKRFKVFLESSLPVINYYDAKGKVRKIDAARPVEEVFESVKGIFGPKTEKVNHYVRFMSKLYMYKFHFLSKRKFGNQCHYC 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00174 236 Pfam Adenylate kinase 25 177 - -
Trre15g00174 236 PRINTS Adenylate kinase signature 24 37 IPR000850 GO:0005524|GO:0006139|GO:0019205
Trre15g00174 236 PRINTS Adenylate kinase signature 52 66 IPR000850 GO:0005524|GO:0006139|GO:0019205
Trre15g00174 236 PRINTS Adenylate kinase signature 164 178 IPR000850 GO:0005524|GO:0006139|GO:0019205
Trre15g00174 236 PRINTS Adenylate kinase signature 147 162 IPR000850 GO:0005524|GO:0006139|GO:0019205
Trre15g00174 236 PRINTS Adenylate kinase signature 100 116 IPR000850 GO:0005524|GO:0006139|GO:0019205
Trre15g00174 236 Hamap UMP-CMP kinase [CMPK1]. 20 202 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Trre15g00174 236 NCBIfam UMP-CMP kinase family 22 199 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Trre15g00174 236 ProSitePatterns Adenylate kinase signature. 100 111 IPR033690 -
Trre15g00174 236 CDD ADK 22 191 IPR000850 GO:0005524|GO:0006139|GO:0019205
Trre15g00174 236 Hamap Adenylate kinase [adk]. 21 200 IPR000850 GO:0005524|GO:0006139|GO:0019205
Trre15g00174 236 PANTHER NUCLEOTIDE KINASE 14 196 IPR000850 GO:0005524|GO:0006139|GO:0019205
Trre15g00174 236 Gene3D - 8 199 IPR027417 -
Trre15g00174 236 FunFam Adenylate kinase 1 15 202 - -
Trre15g00174 236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 199 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00174 Trre-Chr15 1230002 1232561 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00174 K13800 - gmx:100500111 385.185