Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00167 ATGAGTCCTTCTTCATTCCTATTGCTCTTCCTCACAATTATCTTATGTTCTTTCAATCAATTTGTTGATGCCAACCATCTCATCCAACAAACATGCAAGAATAGTTCAAAAGGTGATCCCAACATAAGCTACAAATTTTGTACAACATCTTTTCAATCGGACCATAGGAGCCAATGTGCCCAAAATCTTGAAGAATTAGGTCTCATATCTATAAAGATAACAAGGCACAATGTGACAAATACTTGTGATTACATCAAAGATCTTTTAAAGAAGAAAGATAAAGACCCATTTATCAAAGAATGTTTGAATGATTGTCTTGAAGTATATTCTGATGCCATCACAACTTTTAGAGTAGCCATTAGAGATTACAAGGCAAAACGTTATGAAGATTGTAATTATAAGCTAAGTTCTATCATTGATGCCTCAACAACTTGTGAAGATGGGTTCAAGCAAAAGAATGATGTGATTTCACCATTGACAAAGAGAAACAAAAATGTTTTTCAACTTTCTGCCATAGCACTTTCAATTGTTAACATGCTCAATGTGGATAAATTTAAGGATGGTACATTCTGA 573 0.3333 MSPSSFLLLFLTIILCSFNQFVDANHLIQQTCKNSSKGDPNISYKFCTTSFQSDHRSQCAQNLEELGLISIKITRHNVTNTCDYIKDLLKKKDKDPFIKECLNDCLEVYSDAITTFRVAIRDYKAKRYEDCNYKLSSIIDASTTCEDGFKQKNDVISPLTKRNKNVFQLSAIALSIVNMLNVDKFKDGTF 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00167 190 CDD PMEI-Pla_a_1_like 32 179 IPR034088 -
Trre15g00167 190 PANTHER OS02G0537100 PROTEIN 7 180 - -
Trre15g00167 190 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 25 180 IPR035513 -
Trre15g00167 190 SMART PMEI_2 23 176 IPR006501 GO:0004857
Trre15g00167 190 Pfam Plant invertase/pectin methylesterase inhibitor 27 176 IPR006501 GO:0004857
Trre15g00167 190 NCBIfam pectinesterase inhibitor domain 6 180 IPR006501 GO:0004857
Trre15g00167 190 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 181 IPR035513 -
Trre15g00167 190 FunFam Putative invertase inhibitor 23 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00167 Trre-Chr15 1182032 1182604 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00167 - - gmx:100306248 270.396